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L3_069_000M1_scaffold_438

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_438_1
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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404..1537
DNA (1134bp) protein (378aa)
antifreeze protein type I n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3765A
Uncharacterized protein {ECO:0000313|EMBL:EEJ50491.1}; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
hypothetical protein
L3_069_000M1_scaffold_438_2
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1548..2246
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DX41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA88871.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
L3_069_000M1_scaffold_438_3
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2259..4634
DNA (2376bp) protein (792aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DK21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA88868.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
L3_069_000M1_scaffold_438_4
unknown

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4651..5097
DNA (447bp) protein (149aa)

This feature has no annotations

L3_069_000M1_scaffold_438_5
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5334..6143)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J473_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52551.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ABC-type uncharacterized transport system, ATPase component
L3_069_000M1_scaffold_438_6
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6136..7047)
DNA (912bp) protein (304aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JR65_9CLOT
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDB52552.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ABC-type uncharacterized transport system, permease component
L3_069_000M1_scaffold_438_7
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7236..8216)
DNA (981bp) protein (327aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQG3_9CLOT
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDB52553.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ABC-type uncharacterized transport system, periplasmic component
L3_069_000M1_scaffold_438_8
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8398..8709
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52554.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
cupin
L3_069_000M1_scaffold_438_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8830..10221)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6ITF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52555.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
MatE efflux family protein
L3_069_000M1_scaffold_438_10
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10169..11146)
DNA (978bp) protein (326aa)
Aminoglycoside phosphotransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J478_9CLOT
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:CDB52556.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
aminoglycoside phosphotransferase
L3_069_000M1_scaffold_438_11
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11299..12057
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JR69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52557.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
AraC family transcriptional regulator
L3_069_000M1_scaffold_438_12
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12488..13204
DNA (717bp) protein (239aa)
Predicted branched-chain amino acid permease (Azaleucine resistance) n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQG6_9CLOT
Predicted branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:CDB52558.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L3_069_000M1_scaffold_438_13
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13201..13530
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1P5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52559.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
AzlD; putative branched-chain amino acid permease
L3_069_000M1_scaffold_438_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13603..14313)
DNA (711bp) protein (237aa)
DNA-binding response regulator n=1 Tax=Clostridium sp. CAG:217 RepID=R6ITG3_9CLOT
DNA-binding response regulator {ECO:0000313|EMBL:CDB52560.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_069_000M1_scaffold_438_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14291..15835)
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J482_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_069_000M1_scaffold_438_16
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15837..16481)
DNA (645bp) protein (215aa)
Transcriptional regulator TetR family n=1 Tax=Clostridium sp. CAG:217 RepID=R6JR72_9CLOT
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDB52562.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
TetR family transcriptional regulator
L3_069_000M1_scaffold_438_17
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16792..17058)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52563.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_438_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17256..17948
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1P8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52564.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_438_19
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17967..18974
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6ITG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52565.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_069_000M1_scaffold_438_20
unknown

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comp(19104..19352)
DNA (249bp) protein (83aa)

This feature has no annotations

L3_069_000M1_scaffold_438_21
unknown

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comp(19371..19928)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Streptococcus minor RepID=UPI00037C1FB3
L3_069_000M1_scaffold_438_22

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20028..20240
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6C200_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:AHF27180.1}; TaxID=1393513 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1773.;"
putative transcriptional regulator
L3_069_000M1_scaffold_438_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20462..21421)
DNA (960bp) protein (320aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Malate/lactate dehydrogenases (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3D1_9CLOT
L3_069_000M1_scaffold_438_24
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21530..22381
DNA (852bp) protein (284aa)
Asparaginase/glutaminase n=1 Tax=Clostridium sp. CAG:217 RepID=R6ISK1_9CLOT
Asparaginase/glutaminase {ECO:0000313|EMBL:CDB52235.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
asparaginase/glutaminase
L3_069_000M1_scaffold_438_25
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22685..24154
DNA (1470bp) protein (490aa)
anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Clostridium sp. CAG:217 RepID=R6J0L3_9CLOT
Anthranilate synthase component I {ECO:0000313|EMBL:CDB52234.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_438_26
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24151..24711
DNA (561bp) protein (187aa)
anthranilate synthase, component II (EC:4.1.3.27)
Anthranilate synthase component II n=1 Tax=Clostridium sp. CAG:217 RepID=R6IPH2_9CLOT
Anthranilate synthase component II {ECO:0000313|EMBL:CDB52233.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_069_000M1_scaffold_438_27
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24714..25736
DNA (1023bp) protein (341aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQ51_9CLOT
trpD; anthranilate phosphoribosyltransferase
L3_069_000M1_scaffold_438_28
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25733..26506
DNA (774bp) protein (258aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Indole-3-glycerol phosphate synthase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3C6_9CLOT
Indole-3-glycerol phosphate synthase
L3_069_000M1_scaffold_438_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26503..27090
DNA (588bp) protein (196aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Clostridium sp. CAG:217 RepID=R6ISJ7_9CLOT
L3_069_000M1_scaffold_438_30
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27083..28267
DNA (1185bp) protein (395aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Clostridium sp. CAG:217 RepID=R6J0K9_9CLOT
Displaying items 1-30 of 53 in total

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