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L3_069_000M1_scaffold_457

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_457_1
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(318..2048)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B1P3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30006.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
2', 3'-cyclic nucleotide 2'-phosphodiesterase
L3_069_000M1_scaffold_457_2
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2067..4493)
DNA (2427bp) protein (809aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B2E8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30005.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycoside hydrolase
L3_069_000M1_scaffold_457_3
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4615..5403)
DNA (789bp) protein (263aa)
4Fe-4S binding domain protein n=3 Tax=Bacteroidales RepID=D0TG27_9BACE
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEY82081.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
ferredoxin iron-sulfur protein
L3_069_000M1_scaffold_457_4
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5409..5984)
DNA (576bp) protein (192aa)
Redoxin family protein n=5 Tax=Bacteroidales RepID=C7XD69_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84040.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_069_000M1_scaffold_457_5
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6132..6713)
DNA (582bp) protein (194aa)
indolepyruvate oxidoreductase subunit beta (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit IorB n=5 Tax=Bacteroidales RepID=A6LCX5_PARD8
Putative indolepyruvate ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:EFK63025.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_069_000M1_scaffold_457_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6710..8311)
DNA (1602bp) protein (534aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Indolepyruvate oxidoreductase subunit IorA n=3 Tax=Parabacteroides RepID=A6LCX6_PARD8
indolepyruvate oxidoreductase subunit IorA
L3_069_000M1_scaffold_457_7
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8416..9465)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A6LCX7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB49156.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_069_000M1_scaffold_457_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9831..10445
DNA (615bp) protein (205aa)
Resolvase, N-terminal domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TG32_9BACE
Resolvase, N terminal domain protein {ECO:0000313|EMBL:KDS42511.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
serine type site-specific recombinase Mpi
L3_069_000M1_scaffold_457_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10534..12594)
DNA (2061bp) protein (687aa)
Acetyl-CoA synthetase n=9 Tax=Bacteroidales RepID=A6LCX9_PARD8
acetyl-CoA synthetase
CoA binding domain protein {ECO:0000313|EMBL:EEU50764.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_069_000M1_scaffold_457_10
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12674..13426)
DNA (753bp) protein (251aa)
Hydrogenase accessory protein HypB n=3 Tax=Parabacteroides RepID=E1YST8_9PORP
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EFK63030.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hydrogenase nickel incorporation protein HypB
L3_069_000M1_scaffold_457_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13456..13803)
DNA (348bp) protein (116aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISU4_9BACE
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hydrogenase expression/formation protein HupA
L3_069_000M1_scaffold_457_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13816..16098)
DNA (2283bp) protein (761aa)
Carbamoyltransferase HypF n=3 Tax=Bacteroidales RepID=D0TG36_9BACE
Carbamoyltransferase HypF {ECO:0000313|EMBL:KDS42516.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hydrogenase maturation factor
L3_069_000M1_scaffold_457_13
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16258..16491
DNA (234bp) protein (78aa)
Hydrogenase expression/formation protein HypC n=7 Tax=Bacteroidales RepID=A6LCY3_PARD8
hydrogenase expression/formation protein HypC
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:EFK63033.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_069_000M1_scaffold_457_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16479..17558
DNA (1080bp) protein (360aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISU1_9BACE
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:EFI09018.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hydrogenase expression/formation protein HypD
L3_069_000M1_scaffold_457_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17565..18614
DNA (1050bp) protein (350aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISU0_9BACE
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KDS42519.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hydrogenase expression/formation protein HypE
L3_069_000M1_scaffold_457_16
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18634..19731
DNA (1098bp) protein (366aa)
Hydrogenase (NiFe) small subunit (HydA) n=5 Tax=Bacteroidales RepID=K6ANH2_9PORP
uptake hydrogenase small subunit
Putative hydrogenase-2 small chain {ECO:0000313|EMBL:EEY82094.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_069_000M1_scaffold_457_17
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19747..21468
DNA (1722bp) protein (574aa)
Membrane-bound hydrogenase 1 large subunit {ECO:0000313|EMBL:EEY82095.1}; EC=1.12.99.6 {ECO:0000313|EMBL:EEY82095.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Stable NiFe hydrogenase large subunit n=6 Tax=Bacteroidales RepID=A6LCY7_PARD8
stable NiFe hydrogenase large subunit
L3_069_000M1_scaffold_457_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21483..22220
DNA (738bp) protein (246aa)
NiFe hydrogenase small subunit, HupC n=5 Tax=Bacteroidales RepID=A6LCY8_PARD8
NiFe hydrogenase small subunit, HupC
NiFe hydrogenase small subunit, HupC {ECO:0000313|EMBL:ABR43552.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_457_19
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22217..22696
DNA (480bp) protein (160aa)
Hydrogenase maturation protease superfamily n=2 Tax=Bacteroidales RepID=D7IST6_9BACE
Hydrogenase maturation protease {ECO:0000313|EMBL:EKN29988.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Ni,Fe-hydrogenase maturation factor
L3_069_000M1_scaffold_457_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22662..23399)
DNA (738bp) protein (246aa)
Glycerol uptake facilitator protein n=8 Tax=Bacteroidales RepID=A6LCZ0_PARD8
glycerol uptake facilitator protein
MIP channel s family protein {ECO:0000313|EMBL:KDS73342.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_069_000M1_scaffold_457_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23456..24955)
DNA (1500bp) protein (500aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Glycerol kinase n=4 Tax=Bacteroidales RepID=GLPK_PARD8
glycerol kinase
L3_069_000M1_scaffold_457_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24988..26553)
DNA (1566bp) protein (522aa)
FAD-dependent glycerol-3-phosphate dehydrogenase subunit n=3 Tax=Bacteroidales RepID=D7IST3_9BACE
FAD binding domain protein {ECO:0000313|EMBL:KDS73344.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
glycerol-3-phosphate dehydrogenase
L3_069_000M1_scaffold_457_23
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26784..29129)
DNA (2346bp) protein (782aa)
Glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase n=6 Tax=Bacteroidales RepID=A6LCZ3_PARD8
bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase
Glycosyltransferase family 51 candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase {ECO:0000313|EMBL:CDB49172.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_069_000M1_scaffold_457_24
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29216..30271)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BPA8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29983.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
transmembrane protein
L3_069_000M1_scaffold_457_25
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30381..31268)
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=4 Tax=Bacteroidales RepID=C7XD48_9PORP
transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFI09007.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_069_000M1_scaffold_457_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31356..32279
DNA (924bp) protein (308aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LCZ6_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43560.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_069_000M1_scaffold_457_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32288..33085
DNA (798bp) protein (266aa)
Peptidase n=3 Tax=Bacteroidales RepID=A6LCZ7_PARD8
peptidase
Uncharacterized protein {ECO:0000313|EMBL:EKN25275.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_069_000M1_scaffold_457_28
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33297..33563
DNA (267bp) protein (89aa)
Two-component system sensor histidine kinase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISS7_9BACE
Two-component system sensor histidine kinase {ECO:0000313|EMBL:EFI09004.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_069_000M1_scaffold_457_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33508..34146
DNA (639bp) protein (213aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Two-component system histidine kinase n=2 Tax=Bacteroidales RepID=D7ISS6_9BACE
two-component regulator sensor kinase
L3_069_000M1_scaffold_457_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34219..34860
DNA (642bp) protein (214aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LCZ9_PARD8
hypothetical protein
Bifunctional nuclease family protein {ECO:0000313|EMBL:KDS73351.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Displaying items 1-30 of 40 in total

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