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L3_069_000M1_scaffold_482

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_482_1
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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148..1551
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PNS2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF59598.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
mobilization protein
L3_069_000M1_scaffold_482_2
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1658..2476
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6MDS6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB84097.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
L3_069_000M1_scaffold_482_3
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2856..3146
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 PF6_9BACE">RepID=R6LPF6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB84096.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
Helix-turn-helix protein
L3_069_000M1_scaffold_482_4
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3136..4029
DNA (894bp) protein (298aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
DNA methylase n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LE69_9BACE
DNA modification methylase
L3_069_000M1_scaffold_482_5
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4035..6947
DNA (2913bp) protein (971aa)
N-6 DNA methylase superfamily protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LKM5_9BACE
N-6 DNA methylase superfamily protein {ECO:0000313|EMBL:CDB84094.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
type I restriction-modification system methyltransferase subunit
L3_069_000M1_scaffold_482_6
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6977..9196
DNA (2220bp) protein (740aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6L9B6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB84093.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
AAA domain protein
L3_069_000M1_scaffold_482_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9260..9457)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7A9L1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88319.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_000M1_scaffold_482_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9550..10629
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=R6WSB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14228.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
mannose-1-phosphate guanylyltransferase
L3_069_000M1_scaffold_482_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10912..11913
DNA (1002bp) protein (334aa)
GSCFA family protein n=5 Tax=Parabacteroides RepID=A7A9L5_9PORP
GSCFA family protein {ECO:0000313|EMBL:EEC98252.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_069_000M1_scaffold_482_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11934..14399
DNA (2466bp) protein (822aa)
Alanine racemase {ECO:0000313|EMBL:EEC98254.1}; EC=5.1.1.1 {ECO:0000313|EMBL:EEC98254.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Alanine racemase n=3 Tax=Parabacteroides RepID=A7A9L6_9PORP
bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
L3_069_000M1_scaffold_482_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14509..15366
DNA (858bp) protein (286aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=6 Tax=Parabacteroides RepID=A7A9L7_9PORP
enoyl-(acyl carrier protein) reductase
L3_069_000M1_scaffold_482_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15467..16075
DNA (609bp) protein (203aa)
Sua5/YciO/YrdC/YwlC family protein n=4 Tax=Parabacteroides RepID=A7A9L8_9PORP
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EDN88325.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_482_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16090..17415
DNA (1326bp) protein (442aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=K5ZEC4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11884.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dGTP triphosphohydrolase
L3_069_000M1_scaffold_482_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17412..18422)
DNA (1011bp) protein (337aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Putative ribosome biogenesis GTPase RsgA n=3 Tax=Parabacteroides RepID=A7A9M0_9PORP
ribosome-associated GTPase
L3_069_000M1_scaffold_482_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18427..18990)
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=5 Tax=Parabacteroides RepID=A7A9M1_9PORP
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
frr; ribosome recycling factor
L3_069_000M1_scaffold_482_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19100..20221)
DNA (1122bp) protein (374aa)
Transporter, major facilitator family protein n=2 Tax=Parabacteroides RepID=B7B5N0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14027.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glucose/galactose transporter
L3_069_000M1_scaffold_482_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20270..21133)
DNA (864bp) protein (288aa)
Kinase, PfkB family n=2 Tax=Parabacteroides merdae RepID=A7A9M3_9PORP
Kinase, PfkB family {ECO:0000313|EMBL:EDN88330.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
fructokinase
L3_069_000M1_scaffold_482_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21161..22846)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BFN0_9PORP
Putative fructan beta-fructosidase {ECO:0000313|EMBL:CDD11879.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative glycosylhydrolase
L3_069_000M1_scaffold_482_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22815..23525)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Uridylate kinase n=2 Tax=Parabacteroides johnsonii RepID=B7B5N3_9PORP
pyrH; uridylate kinase
L3_069_000M1_scaffold_482_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23902..24126
DNA (225bp) protein (75aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A7A9M6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88333.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_000M1_scaffold_482_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24375..27161)
DNA (2787bp) protein (929aa)
Excinuclease ABC A subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WR63_9PORP
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
excinuclease ABC subunit A
L3_069_000M1_scaffold_482_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27297..30524)
DNA (3228bp) protein (1076aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BG79_9PORP
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDN88337.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
family 2 glycoside hydrolase
L3_069_000M1_scaffold_482_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30707..32296
DNA (1590bp) protein (530aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BFN4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11855.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_482_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32309..33160
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6A6N1_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD11854.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
L3_069_000M1_scaffold_482_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33637..34764
DNA (1128bp) protein (376aa)
Clostripain family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WL17_9PORP
Clostripain family {ECO:0000313|EMBL:CDD11853.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
clostripain-like protein
L3_069_000M1_scaffold_482_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34773..37142)
DNA (2370bp) protein (790aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7A9N4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88341.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_482_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37275..38285
DNA (1011bp) protein (337aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Aspartate-semialdehyde dehydrogenase n=2 Tax=Parabacteroides RepID=K5ZRB8_9PORP
aspartate-semialdehyde dehydrogenase
L3_069_000M1_scaffold_482_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38404..39294)
DNA (891bp) protein (297aa)
dTDP-4-dehydrorhamnose reductase n=3 Tax=Parabacteroides RepID=A7A9N6_9PORP
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDD11850.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative rhamnose biosynthesis-related protein
L3_069_000M1_scaffold_482_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39294..40514)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WY31_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11849.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_482_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41295..42659
DNA (1365bp) protein (455aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=3 Tax=Parabacteroides RepID=A7A9P0_9PORP
Displaying items 1-30 of 47 in total

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