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L3_069_000M1_scaffold_500

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_500_1
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(1..138)
DNA (138bp) protein (46aa)
tufA; translation elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=4 Tax=Acidaminococcus RepID=G4Q750_ACIIR
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_2
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(165..2249)
DNA (2085bp) protein (695aa)
Elongation factor G n=5 Tax=Acidaminococcus RepID=G4Q751_ACIIR
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
translation elongation factor G
L3_069_000M1_scaffold_500_3
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(2285..2755)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=2 Tax=Acidaminococcus RepID=D2RMI3_ACIFV
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
30S ribosomal protein S7
L3_069_000M1_scaffold_500_4
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(2797..3180)
DNA (384bp) protein (128aa)
30S ribosomal protein S12 n=4 Tax=Acidaminococcus RepID=U2VM68_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
30S ribosomal protein S12
L3_069_000M1_scaffold_500_5
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3242..3496)
DNA (255bp) protein (85aa)
50S ribosomal protein L7ae n=5 Tax=Acidaminococcus RepID=G4Q754_ACIIR
50S ribosomal protein L7ae
50S ribosomal protein L7ae {ECO:0000313|EMBL:AEQ23536.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_6
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3940..4284)
DNA (345bp) protein (115aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q756_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23538.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_7
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4540..5025)
DNA (486bp) protein (162aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q757_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23539.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_8
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5037..5801)
DNA (765bp) protein (255aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q758_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23540.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_9
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5819..6520)
DNA (702bp) protein (234aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q759_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERL16369.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
L3_069_000M1_scaffold_500_10
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6517..8451)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Acidaminococcus sp. HPA0509 RepID=S3A3H6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23542.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_11
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8457..9443)
DNA (987bp) protein (329aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEH91505.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EEH91505.1};; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
UDP-glucose 4-epimerase n=1 Tax=Acidaminococcus sp. HPA0509 RepID=S2Z202_9FIRM
L3_069_000M1_scaffold_500_12
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9456..10820)
DNA (1365bp) protein (455aa)
manB; phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=5 Tax=Acidaminococcus RepID=G4Q762_ACIIR
Phosphomannomutase {ECO:0000313|EMBL:AEQ23544.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_13
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10836..11834)
DNA (999bp) protein (333aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q763_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23545.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_14
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12568..12747)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Acidaminococcus RepID=R6MCP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB97383.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L3_069_000M1_scaffold_500_15
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12770..13336)
DNA (567bp) protein (189aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q765_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23547.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_16
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13495..16041)
DNA (2547bp) protein (849aa)
ATPase n=4 Tax=Acidaminococcus RepID=G4Q766_ACIIR
ATPase
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_17
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16256..17374
DNA (1119bp) protein (373aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q767_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23549.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_18
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17512..18468)
DNA (957bp) protein (319aa)
Adenylate cyclase n=3 Tax=Acidaminococcus RepID=G4Q768_ACIIR
adenylate cyclase
Adenylate cyclase {ECO:0000313|EMBL:AEQ23550.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_19
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18483..18908)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Acidaminococcus intestini (strain RyC-MR95) RepID=G4Q769_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23551.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_20
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19028..19546
DNA (519bp) protein (173aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q770_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23552.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_21
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20035..21210)
DNA (1176bp) protein (392aa)
Alcohol dehydrogenase, iron-dependent n=4 Tax=Acidaminococcus RepID=C0WBJ3_9FIRM
Putative NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:ERL16349.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
hypothetical protein
L3_069_000M1_scaffold_500_22
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21319..22683)
DNA (1365bp) protein (455aa)
aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde dehydrogenase n=4 Tax=Acidaminococcus RepID=G4Q774_ACIIR
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L3_069_000M1_scaffold_500_23
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22784..23107)
DNA (324bp) protein (108aa)
Arsenical resistance repressor arsR n=5 Tax=Acidaminococcus RepID=G4Q775_ACIIR
arsenical resistance repressor arsR
Arsenical resistance repressor arsR {ECO:0000313|EMBL:AEQ23557.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_24
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23229..23834)
DNA (606bp) protein (202aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q776_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23558.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_25
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23990..25345)
DNA (1356bp) protein (452aa)
ABC branched-chain amino acid transporter carrier protein n=4 Tax=Acidaminococcus RepID=G4Q777_ACIIR
branched-chain amino acid ABC transporter carrier protein
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EEH90479.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
L3_069_000M1_scaffold_500_26
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25415..26170)
DNA (756bp) protein (252aa)
butA; short-chain dehydrogenase/reductase (EC:1.1.1.303 1.1.1.4)
KR domain protein n=1 Tax=Acidaminococcus sp. BV3L6 RepID=U2TTR0_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEH90480.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
L3_069_000M1_scaffold_500_27
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26261..26458)
DNA (198bp) protein (66aa)
Cold-shock DNA-binding domain protein n=7 Tax=Acidaminococcus RepID=D2RNH8_ACIFV
cold-shock protein
Cold-shock DNA-binding protein {ECO:0000313|EMBL:AEQ23561.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_000M1_scaffold_500_28
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26933..27223)
DNA (291bp) protein (97aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q7P2_ACIIR
Uncharacterized protein {ECO:0000313|EMBL:CDB93070.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
hypothetical protein
L3_069_000M1_scaffold_500_29
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27223..27687)
DNA (465bp) protein (155aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Acidaminococcus RepID=G4Q7P3_ACIIR
peptidyl-prolyl cis-trans isomerase
L3_069_000M1_scaffold_500_30
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27742..28731)
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Acidaminococcus RepID=R6MAX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93074.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
hypothetical protein
Displaying items 1-30 of 41 in total

View Taxonomy