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L3_069_000M1_scaffold_527

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_527_1
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(142..1077)
DNA (936bp) protein (312aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Protease HtpX homolog n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GQJ5_9BIFI
htpX; heat shock HtpX endopeptidase
L3_069_000M1_scaffold_527_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1249..2700)
DNA (1452bp) protein (484aa)
Pyridine nucleotide-disulfide oxidoreductase n=3 Tax=Bifidobacterium RepID=E4V795_BIFBI
Ferredoxin--NADP reductase {ECO:0000313|EMBL:EKE50320.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
fprA; ferredoxin--NADP reductase
L3_069_000M1_scaffold_527_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2871..5072)
DNA (2202bp) protein (734aa)
ziaA; zinc-transporting ATPase (EC:3.6.3.5)
Zinc-transporting ATPase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IMK9_BIFBI
Zinc-transporting ATPase {ECO:0000313|EMBL:EKE49975.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_069_000M1_scaffold_527_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5450..7345)
DNA (1896bp) protein (632aa)
Putative serine protease n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFQ2_BIFBI
degP; putative serine protease
Putative serine protease {ECO:0000313|EMBL:AFL03715.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_069_000M1_scaffold_527_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7714..9015
DNA (1302bp) protein (434aa)
tgt; queuine tRNA-ribosyl transferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Queuine tRNA-ribosyltransferase n=4 Tax=Bifidobacterium bifidum RepID=E4NYG1_BIFBP
L3_069_000M1_scaffold_527_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9643..10119)
DNA (477bp) protein (159aa)
Acetyltransferase (GNAT) family n=2 Tax=Bifidobacterium RepID=E3ELG6_BIFBS
GNAT family acetyltransferase
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:ADO52361.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_069_000M1_scaffold_527_7
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10137..10955)
DNA (819bp) protein (273aa)
bloH; carboxylesterase (EC:3.1.1.1)
Carboxylesterase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GC89_9BIFI
Carboxylesterase {ECO:0000313|EMBL:CDB23023.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_069_000M1_scaffold_527_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11080..11412)
DNA (333bp) protein (111aa)
UPF0145 protein BBIF_0154 n=5 Tax=Bifidobacterium RepID=E3ELG4_BIFBS
hypothetical protein
UPF0145 protein BBNG_00041 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_069_000M1_scaffold_527_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11542..12234
DNA (693bp) protein (231aa)
DivIVA domain protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAQ5_BIFBI
DivIVA domain protein {ECO:0000313|EMBL:EFR49493.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_069_000M1_scaffold_527_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12451..12900
DNA (450bp) protein (150aa)
Mutator mutT protein n=3 Tax=Bifidobacterium bifidum RepID=U2CJV5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ97321.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
MutT/nudix family protein
L3_069_000M1_scaffold_527_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12897..16082
DNA (3186bp) protein (1062aa)
Putative ATP-dependent helicase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFN6_BIFBI
Putative ATP-dependent helicase {ECO:0000313|EMBL:AFL03699.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
putative ATP-dependent helicase
L3_069_000M1_scaffold_527_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16432..16932
DNA (501bp) protein (167aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WFN5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42229.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_069_000M1_scaffold_527_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16937..17941)
DNA (1005bp) protein (335aa)
msrAB; peptide methionine sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase n=4 Tax=Bifidobacterium RepID=I3WFN4_BIFBI
Bifunctional methionine sulfoxide reductase {ECO:0000313|EMBL:BAQ97318.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_069_000M1_scaffold_527_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18043..18570)
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAQ0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR49488.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_069_000M1_scaffold_527_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18622..19377)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LAD3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF14904.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L3_069_000M1_scaffold_527_16
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19641..20615)
DNA (975bp) protein (325aa)
membrane protein n=1 Tax=Bifidobacterium bifidum RepID=UPI00019763E1
Putative permease EamA-like transporter family {ECO:0000313|EMBL:CDB23032.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
permease
L3_069_000M1_scaffold_527_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20651..21700)
DNA (1050bp) protein (350aa)
PldB Lysophospholipase L2 {ECO:0000313|EMBL:KFI42224.1}; EC=3.1.1.5 {ECO:0000313|EMBL:KFI42224.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
pldB; Lysophospholipase L2 (EC:3.1.1.5)
Hydrolase, alpha/beta domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DRX5_BIFBI
L3_069_000M1_scaffold_527_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21857..24184)
DNA (2328bp) protein (776aa)
Phage infection protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFM9_BIFBI
Phage infection protein {ECO:0000313|EMBL:AFL03692.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
pip; phage infection protein
L3_069_000M1_scaffold_527_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24181..26967)
DNA (2787bp) protein (929aa)
Phage infection protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MUA8_BIFBI
pip; phage infection protein
Phage infection protein {ECO:0000313|EMBL:EKF15608.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_069_000M1_scaffold_527_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27231..29762)
DNA (2532bp) protein (844aa)
dipeptidyl peptidase (EC:3.4.14.5)
Dipeptidyl peptidase {ECO:0000313|EMBL:AFL03690.1}; EC=3.4.14.5 {ECO:0000313|EMBL:AFL03690.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Dipeptidyl peptidase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFM7_BIFBI
L3_069_000M1_scaffold_527_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30003..30704
DNA (702bp) protein (234aa)
FHA domain containing protein n=8 Tax=Bifidobacterium RepID=E3ELF1_BIFBS
hypothetical protein
FHA domain-containing protein {ECO:0000313|EMBL:EKF14860.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_069_000M1_scaffold_527_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30732..31274
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFM5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03688.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_069_000M1_scaffold_527_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31281..32939
DNA (1659bp) protein (553aa)
prpC; protein phosphatase (EC:3.1.3.16)
Protein phosphatase {ECO:0000313|EMBL:AFL03687.1}; EC=3.1.3.16 {ECO:0000313|EMBL:AFL03687.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Protein phosphatase n=3 Tax=Bifidobacterium bifidum RepID=I3WFM4_BIFBI
L3_069_000M1_scaffold_527_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32936..34414
DNA (1479bp) protein (493aa)
Protein involved in cell wall formation and stabilization of the FtsZ ring during cell division n=8 Tax=Bifidobacterium RepID=E3EPL6_BIFBS
ftsW; putative cell division protein
FtsW Cell division protein {ECO:0000313|EMBL:KFI42218.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_069_000M1_scaffold_527_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34411..35877
DNA (1467bp) protein (489aa)
Penicillin binding transpeptidase n=2 Tax=Bifidobacterium bifidum RepID=E3EPL5_BIFBS
mrdA; penicillin-binding protein
Penicillin binding transpeptidase {ECO:0000313|EMBL:ADO52342.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_069_000M1_scaffold_527_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35874..36857
DNA (984bp) protein (328aa)
PknA Serine/threonine protein kinase {ECO:0000313|EMBL:KFI42216.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFI42216.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Serine/threonine protein kinase n=6 Tax=Bifidobacterium RepID=E3EPL4_BIFBS
Serine/threonine protein kinase
L3_069_000M1_scaffold_527_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36860..38917
DNA (2058bp) protein (686aa)
pknB; putative serine/threonine-protein kinase (EC:2.7.11.1)
Kinase domain protein n=3 Tax=Bifidobacterium bifidum RepID=E4VAN7_BIFBI
Kinase domain protein {ECO:0000313|EMBL:EFR49475.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_069_000M1_scaffold_527_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39143..39787)
DNA (645bp) protein (215aa)
pabA; para-aminobenzoate synthase glutamineamido transferase component II (EC:2.6.1.85)
PabA Para-aminobenzoate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:KFI42214.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KFI42214.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Para-aminobenzoate synthase glutamine amidotransferase component II n=7 Tax=Bifidobacterium bifidum RepID=E3EPL2_BIFBS
L3_069_000M1_scaffold_527_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39883..41112)
DNA (1230bp) protein (410aa)
Sortase family protein n=2 Tax=Bifidobacterium bifidum RepID=E3EPL1_BIFBS
Sortase family protein
Sortase family protein {ECO:0000313|EMBL:ADO52338.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_069_000M1_scaffold_527_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41109..41897)
DNA (789bp) protein (263aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=K2HX53_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF15688.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Displaying items 1-30 of 41 in total

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