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L3_069_000M1_scaffold_546

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_546_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..148
DNA (147bp) protein (49aa)
Probable transcriptional regulatory protein BN757_02787 n=1 Tax=Clostridium sp. CAG:7 RepID=R5INC3_9CLOT
Probable transcriptional regulatory protein BN757_02787 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
conserved hypothetical protein TIGR01033
L3_069_000M1_scaffold_546_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

427..909
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3U1_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
transcription elongation factor GreA
L3_069_000M1_scaffold_546_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

947..2890
DNA (1944bp) protein (648aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium clostridioforme CM201 RepID=N9VLB4_9CLOT
L3_069_000M1_scaffold_546_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3129..3602
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9VKP2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98238.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3602..3778
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9X6C5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98237.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3802..4584
DNA (783bp) protein (261aa)
Chromosome partitioning protein ParA n=2 Tax=Clostridiales RepID=G2T4V8_ROSHA
chromosome partitioning protein ParA
Chromosome partitioning protein ParA {ECO:0000313|EMBL:AEN98236.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_7
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4577..5458
DNA (882bp) protein (294aa)
ParB-like partition protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9X5R2_9CLOT
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AEN98235.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5474..6538
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9VLB6_9CLOT
replication initiator A domain-containing protein
Replication initiator A domain-containing protein {ECO:0000313|EMBL:AEN98234.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_9
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6495..6851
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9VKP4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98233.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6898..7104)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9X6C9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98232.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7205..7366
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9WUQ6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98231.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_12
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7378..7773
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9X5R6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98230.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_13
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7866..8522
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9VLC1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98229.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_14
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8601..9149
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9VKP8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98228.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_15
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9264..9689
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9X6D3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98227.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_16
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9809..10285
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9WUQ9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98226.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10282..12135
DNA (1854bp) protein (618aa)
TraG/TraD family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG59_CLOBU
TraG/TraD family protein {ECO:0000313|EMBL:ENZ31117.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative conjugative transfer proteinTn1549-like, CTn4-Orf4
L3_069_000M1_scaffold_546_18
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12243..12458
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MNZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72386.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_069_000M1_scaffold_546_19
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12522..13334
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9X5V9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98187.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_20
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13398..13793
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9VLG2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98186.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_21
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13753..16203
DNA (2451bp) protein (817aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9VKU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AEN98185.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
hypothetical protein
L3_069_000M1_scaffold_546_22
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16203..18791
DNA (2589bp) protein (863aa)
Peptidase, M23 family protein n=2 Tax=Clostridiales RepID=G2T4Q6_ROSHA
Peptidase, M23 family protein {ECO:0000313|EMBL:AEN98184.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
peptidase, M23 family protein
L3_069_000M1_scaffold_546_23
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18813..19097
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9WUV5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98183.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_24
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19072..20796
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9X5W1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AEN98182.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
hypothetical protein
L3_069_000M1_scaffold_546_25
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20800..22899
DNA (2100bp) protein (700aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
DNA topoisomerase n=1 Tax=Clostridium clostridioforme CM201 RepID=N9VLG7_9CLOT
DNA topoisomerase III
L3_069_000M1_scaffold_546_26
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22915..23277
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9VKU4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98180.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_27
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23320..32019
DNA (8700bp) protein (2900aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9X6J8_9CLOT
Putative adenine-specific DNA methylase {ECO:0000313|EMBL:AEN98179.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
putative adenine-specific DNA methylase
L3_069_000M1_scaffold_546_28
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32186..33214
DNA (1029bp) protein (343aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9WUV9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98176.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_29
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33319..37347
DNA (4029bp) protein (1343aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9X5W6_9CLOT
DNA repair protein
DNA repair protein {ECO:0000313|EMBL:AEN98175.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_069_000M1_scaffold_546_30
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37351..37578
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9VLH0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98174.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Displaying items 1-30 of 33 in total

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