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L3_069_000M1_scaffold_580

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_580_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..630
DNA (630bp) protein (210aa)
NADPH/quinone reductase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARZ0_BIFLN
qor2; NADPH/quinone reductase
NADPH/quinone reductase {ECO:0000313|EMBL:AEI97947.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_069_000M1_scaffold_580_2
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

786..1286
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=3 Tax=Bifidobacterium RepID=E5Y0I3_9BIFI
purE; pure
L3_069_000M1_scaffold_580_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1270..2448
DNA (1179bp) protein (393aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=9 Tax=Bifidobacterium longum RepID=D6ZT30_BIFLJ
purK; purk
L3_069_000M1_scaffold_580_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2457..2885
DNA (429bp) protein (143aa)
Ferric uptake regulation protein n=5 Tax=Bifidobacterium breve RepID=F9XXL6_BIFBU
Ferric uptake regulation protein
Ferric uptake regulation protein {ECO:0000313|EMBL:ABE95265.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_069_000M1_scaffold_580_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2920..3135)
DNA (216bp) protein (72aa)
Uncharacterized protein n=17 Tax=Bifidobacterium RepID=Q8G590_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ22384.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_069_000M1_scaffold_580_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3110..3265)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E823_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54167.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
ABC transporter
L3_069_000M1_scaffold_580_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3397..4320
DNA (924bp) protein (308aa)
ABC-type metal ion transport system periplasmic component n=9 Tax=Bifidobacterium RepID=B3DT60_BIFLD
hypothetical protein
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EEQ54166.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_069_000M1_scaffold_580_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4581..6656
DNA (2076bp) protein (692aa)
Putative sulfatase n=1 Tax=Bifidobacterium longum E18 RepID=V6XVB7_BIFLN
Putative sulfatase {ECO:0000313|EMBL:ESV33098.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
mdoB1; mdob1
L3_069_000M1_scaffold_580_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6777..8414
DNA (1638bp) protein (546aa)
Aldehyde dehydrogenase n=7 Tax=Bifidobacterium RepID=E8MHA4_BIFL2
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_069_000M1_scaffold_580_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8788..10056)
DNA (1269bp) protein (423aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Phosphoribosylamine--glycine ligase n=16 Tax=Bifidobacterium RepID=B3DT57_BIFLD
purD; purd
L3_069_000M1_scaffold_580_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10083..11120)
DNA (1038bp) protein (346aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Phosphoribosylformylglycinamidine cyclo-ligase n=5 Tax=Bifidobacterium longum RepID=PUR5_BIFLD
phosphoribosylaminoimidazole synthase
L3_069_000M1_scaffold_580_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11240..12751)
DNA (1512bp) protein (504aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Amidophosphoribosyltransferase n=3 Tax=Bifidobacterium longum RepID=B3DT55_BIFLD
purF; glutamine phosphoribosylpyrophosphate amidotransferase
L3_069_000M1_scaffold_580_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13155..13940)
DNA (786bp) protein (262aa)
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) n=15 Tax=Bifidobacterium RepID=D6D9I2_BIFLN
amino acid ABC transporter ATP-binding protein
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIW43481.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_069_000M1_scaffold_580_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13937..14824)
DNA (888bp) protein (296aa)
Permease of the ABC transporter n=5 Tax=Bifidobacterium RepID=V6XZX2_BIFLN
amino acid ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEY23242.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_069_000M1_scaffold_580_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14934..15797)
DNA (864bp) protein (288aa)
Bacterial extracellular solute-binding s, 3 family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I047_BIFLN
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:CCK34535.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hisJ4; amino acid ABC transporter/signal transduction systems periplasmic protein
L3_069_000M1_scaffold_580_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15999..16469)
DNA (471bp) protein (157aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=Q8G599_BIFLO
hypothetical protein
Cupin domain protein, PF06172 family {ECO:0000313|EMBL:EIJ22380.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_069_000M1_scaffold_580_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16539..17912)
DNA (1374bp) protein (458aa)
Cytosine deaminase n=17 Tax=Bifidobacterium RepID=B3DT50_BIFLD
chlorohydrolase
Possible chlorohydrolase-like protein {ECO:0000313|EMBL:AAN24923.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_069_000M1_scaffold_580_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17952..19454)
DNA (1503bp) protein (501aa)
S-adenosyl-L-homocysteine hydrolase n=6 Tax=Bifidobacterium RepID=E8MHB3_BIFL2
S-adenosyl-L-homocysteine hydrolase
S-adenosyl-L-homocysteine hydrolase {ECO:0000313|EMBL:AIW43486.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_069_000M1_scaffold_580_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19619..21208
DNA (1590bp) protein (530aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=Q8G5A2_BIFLO
hypothetical protein
ImpB/MucB/SamB family protein involved in DNA repair {ECO:0000313|EMBL:ESV33109.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_069_000M1_scaffold_580_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21205..21423
DNA (219bp) protein (73aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=V6XV04_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81139.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_069_000M1_scaffold_580_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21457..22434)
DNA (978bp) protein (326aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=13 Tax=Bifidobacterium RepID=D6D9H6_BIFLN
hypothetical protein
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEQ54152.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_069_000M1_scaffold_580_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22542..23507)
DNA (966bp) protein (322aa)
Transcriptional regulator n=8 Tax=Bifidobacterium longum RepID=E8MHB7_BIFL2
transcriptional regulator
LysR substrate-binding domain protein {ECO:0000313|EMBL:EIJ32323.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_069_000M1_scaffold_580_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23726..25240
DNA (1515bp) protein (505aa)
Transporter, NhaC family (TC 2.A.35) n=9 Tax=Bifidobacterium RepID=D6D9H4_BIFLN
nhaC; nhac
Possible Na(+)/H(+) antiporter {ECO:0000313|EMBL:AAN24918.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_069_000M1_scaffold_580_24
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25254..25913)
DNA (660bp) protein (220aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=C5E802_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95163.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_069_000M1_scaffold_580_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25910..27280)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=B3DT40_BIFLD
hypothetical protein
Alcohol acetyltransferase {ECO:0000313|EMBL:AIW43493.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_069_000M1_scaffold_580_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27253..28551)
DNA (1299bp) protein (433aa)
Esterase/lipase n=11 Tax=Bifidobacterium RepID=B3DT39_BIFLD
lipase/esterase
Esterase {ECO:0000313|EMBL:KEY32528.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_069_000M1_scaffold_580_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28689..32423)
DNA (3735bp) protein (1245aa)
Phosphoribosylformylglycinamidine synthase n=2 Tax=Bifidobacterium longum RepID=E8MHC2_BIFL2
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:BAJ66175.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
phosphoribosylformylglycinamidine synthase
L3_069_000M1_scaffold_580_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32486..33238)
DNA (753bp) protein (251aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:CBK70823.1}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:CBK70823.1};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=18 Tax=Bacteria RepID=PUR7_BIFLD
phosphoribosylaminoimidazolesuccinocarboxamide synthase
L3_069_000M1_scaffold_580_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33324..33446)
DNA (123bp) protein (41aa)
Uncharacterized protein n=13 Tax=Bifidobacterium longum RepID=V6XZY4_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32273.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_069_000M1_scaffold_580_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33631..34968)
DNA (1338bp) protein (446aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Phosphoribosylglycinamide formyltransferase 2 n=9 Tax=Bifidobacterium RepID=E8MHC4_BIFL2
phosphoribosylglycinamide formyltransferase
Displaying items 1-30 of 34 in total

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