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L3_069_000M1_scaffold_581

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_581_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..541
DNA (540bp) protein (180aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Glucose-6-phosphate isomerase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASX3_BIFLN
glucose-6-phosphate isomerase
L3_069_000M1_scaffold_581_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

974..2116
DNA (1143bp) protein (381aa)
Uncharacterized protein n=6 Tax=Bifidobacterium bifidum RepID=E4V7X5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ97553.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_069_000M1_scaffold_581_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2122..3120
DNA (999bp) protein (333aa)
Uncharacterized protein n=5 Tax=Bifidobacterium bifidum RepID=I3WGB8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42442.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_069_000M1_scaffold_581_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3132..4250
DNA (1119bp) protein (373aa)
Uncharacterized protein n=5 Tax=Bifidobacterium bifidum RepID=I3WGB9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52571.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_069_000M1_scaffold_581_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4634..5128
DNA (495bp) protein (165aa)
Uncharacterized protein n=7 Tax=Bifidobacterium bifidum RepID=I3WGC1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42444.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_069_000M1_scaffold_581_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5138..5875)
DNA (738bp) protein (246aa)
Magnesium transporter protein, ATPase subunit n=6 Tax=Bifidobacterium bifidum RepID=E3EPN6_BIFBS
Mg(2+) transport ATPase protein C
Magnesium transporter protein, ATPase subunit {ECO:0000313|EMBL:ADO52573.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_069_000M1_scaffold_581_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6005..8794)
DNA (2790bp) protein (930aa)
Cation transport ATPase {ECO:0000313|EMBL:AFL03936.1}; EC=3.6.3.2 {ECO:0000313|EMBL:AFL03936.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
mgtA; cation transport ATPase (EC:3.6.3.2)
Cation transport ATPase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGC3_BIFBI
L3_069_000M1_scaffold_581_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8882..10381)
DNA (1500bp) protein (500aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGC4_BIFBI
abcT; ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFL03937.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_069_000M1_scaffold_581_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10507..12288)
DNA (1782bp) protein (594aa)
Putative aliphatic sulfonates transport permease n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGC5_BIFBI
ssuC; putative aliphatic sulfonates transport permease
Putative aliphatic sulfonates transport permease {ECO:0000313|EMBL:AFL03938.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_069_000M1_scaffold_581_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13096..14064)
DNA (969bp) protein (323aa)
DeoR family transcriptional regulator n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZR1_BIFBP
Family transcriptional regulator DeoR {ECO:0000313|EMBL:EKE51530.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
family transcriptional regulator DeoR
L3_069_000M1_scaffold_581_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14413..15675
DNA (1263bp) protein (421aa)
Galactitol permease IIC component n=4 Tax=Bifidobacterium RepID=I3WGC7_BIFBI
galactitol permease IIC component
Putative PTS system galactitol-specific IIC component {ECO:0000313|EMBL:CDB22150.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_069_000M1_scaffold_581_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15718..17241
DNA (1524bp) protein (508aa)
L-xylulose/3-keto-L-gulonate kinase (EC:2.7.1.53)
L-xylulose/3-keto-L-gulonate kinase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HYJ3_BIFBI
L-xylulose/3-keto-L-gulonate kinase {ECO:0000313|EMBL:EKE51532.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_069_000M1_scaffold_581_13
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17243..18133
DNA (891bp) protein (297aa)
Hexulose-6-phosphate somerase n=2 Tax=Bifidobacterium RepID=E3EPP4_BIFBS
sgbU; hexulose-6-phosphate somerase
Hexulose-6-phosphate somerase {ECO:0000313|EMBL:CDB22148.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_069_000M1_scaffold_581_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18225..18917
DNA (693bp) protein (231aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:AFL03943.1}; EC=5.1.3.4 {ECO:0000313|EMBL:AFL03943.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
AraD L-ribulose-5-phosphate 4-epimerase n=2 Tax=Bifidobacterium bifidum RepID=E4NZR5_BIFBP
L3_069_000M1_scaffold_581_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19380..19757
DNA (378bp) protein (126aa)
50S ribosomal protein L19 n=8 Tax=Bifidobacterium RepID=E3EPP6_BIFBS
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_069_000M1_scaffold_581_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19878..20693
DNA (816bp) protein (272aa)
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Signal peptidase I n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGD2_BIFBI
L3_069_000M1_scaffold_581_17
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20712..21413
DNA (702bp) protein (234aa)
rnhB; ribonuclease HII RnhB (EC:3.1.26.4)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Ribonuclease n=6 Tax=Bifidobacterium RepID=E3EPP8_BIFBS
L3_069_000M1_scaffold_581_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21727..22806
DNA (1080bp) protein (360aa)
Lactose operon repressor n=3 Tax=Bifidobacterium bifidum RepID=I3WGD4_BIFBI
lacI; lactose operon repressor
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADO52586.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_069_000M1_scaffold_581_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23426..25369)
DNA (1944bp) protein (648aa)
FadD Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:KFI42458.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KFI42458.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-binding enzyme n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BVR9_BIFBI
L3_069_000M1_scaffold_581_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25805..26680
DNA (876bp) protein (292aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Pyridoxal biosynthesis lyase PdxS n=7 Tax=Bifidobacterium RepID=E3EPQ1_BIFBS
pdxS; pyridoxal biosynthesis lyase
L3_069_000M1_scaffold_581_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26883..27503
DNA (621bp) protein (207aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Glutamine amidotransferase subunit PdxT n=2 Tax=Bifidobacterium bifidum RepID=E4V7Z7_BIFBI
pdxT; glutamine amidotransferase subunit PdxT
L3_069_000M1_scaffold_581_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27479..27568)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6G9M6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22138.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_069_000M1_scaffold_581_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28147..28323
DNA (177bp) protein (59aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=I3WGD9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42461.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_069_000M1_scaffold_581_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28343..29245
DNA (903bp) protein (301aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bifidobacterium bifidum RepID=E4V7Z9_BIFBI
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EFR49741.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
endo-1,4-beta-xylanase
L3_069_000M1_scaffold_581_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29297..29851
DNA (555bp) protein (185aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bifidobacterium bifidum RepID=E4V7Z9_BIFBI
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EFR49741.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
xynD; putative endo-1,4-beta-xylanase
L3_069_000M1_scaffold_581_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29862..31037
DNA (1176bp) protein (392aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CE58_BIFBI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KFI42462.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
LacI family transcriptional regulator
L3_069_000M1_scaffold_581_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31065..31667)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CCN7_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82295.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_069_000M1_scaffold_581_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31709..32593
DNA (885bp) protein (295aa)
2,5-diketo-D-gluconic acid reductase {ECO:0000313|EMBL:KFI42463.1}; EC=1.1.1.188 {ECO:0000313|EMBL:KFI42463.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Aldo/keto diketogulonate reductase n=7 Tax=Bifidobacterium RepID=E3EPQ7_BIFBS
Aldo/keto diketogulonate reductase
L3_069_000M1_scaffold_581_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32771..33448
DNA (678bp) protein (226aa)
Conserved hypothetical secreted protein n=3 Tax=Bifidobacterium RepID=E4NZS6_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52595.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_069_000M1_scaffold_581_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33604..34905
DNA (1302bp) protein (434aa)
MntH Manganese transport protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZS7_BIFBP
mntH; manganese transport protein
Putative manganese transport protein {ECO:0000313|EMBL:AFL03959.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Displaying items 1-30 of 49 in total

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