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L3_069_000M1_scaffold_595

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_595_1
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..328)
DNA (327bp) protein (109aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CBK63979.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CBK63979.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Glycerophosphoryl diester phosphodiesterase n=2 Tax=Alistipes RepID=D4IM17_9BACT
L3_069_000M1_scaffold_595_2
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(404..2440)
DNA (2037bp) protein (679aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003102F6C
Uncharacterized protein {ECO:0000313|EMBL:EFR56358.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
metal-dependent hydrolase
L3_069_000M1_scaffold_595_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2465..4327)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030A043A
PDK repeat-containing protein
PDK repeat-containing protein {ECO:0000313|EMBL:CCZ77139.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_069_000M1_scaffold_595_4
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4354..5778)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000369F318
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCZ77140.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
glycerophosphoryl diester phosphodiesterase
L3_069_000M1_scaffold_595_5
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5789..7249)
DNA (1461bp) protein (487aa)
carbohydrate-binding protein SusD n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EFB1B3
RagB/SusD family protein
RagB/SusD family protein {ECO:0000313|EMBL:CCZ77141.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_069_000M1_scaffold_595_6
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7262..10453)
DNA (3192bp) protein (1064aa)
TonB-linked outer membrane protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036AE0ED
SusC/RagA family TonB-linked outer membrane protein
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AFL77018.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_069_000M1_scaffold_595_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10450..10824)
DNA (375bp) protein (125aa)
TonB-linked outer membrane protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036AE0ED
SusC/RagA family TonB-linked outer membrane protein
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AFL77018.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_069_000M1_scaffold_595_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10940..12022)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EBCAC8
Fe2+-dicitrate sensor membrane protein
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:AFL77017.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_069_000M1_scaffold_595_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12059..12613)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000366C546
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 {ECO:0000313|EMBL:AFL77016.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_069_000M1_scaffold_595_10
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13216..13995)
DNA (780bp) protein (260aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
UDP-N-acetylglucosamine acyltransferase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031286BD
L3_069_000M1_scaffold_595_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14066..15457)
DNA (1392bp) protein (464aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC:3.5.1.- 4.2.1.-)
hydroxymyristoyl-ACP dehydratase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FDE8E5
L3_069_000M1_scaffold_595_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15541..16341
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030BB978
TonB family C-terminal domain
TonB family protein {ECO:0000313|EMBL:CDD23949.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_069_000M1_scaffold_595_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16574..16921
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031D9FAE
Uncharacterized protein {ECO:0000313|EMBL:EDN86072.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_595_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17260..18141)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037A4851
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EFR58652.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
esterase/lipase
L3_069_000M1_scaffold_595_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18549..20228
DNA (1680bp) protein (560aa)
trehalose synthase (EC:5.4.99.16)
Trehalose synthase {ECO:0000313|EMBL:CBK63352.1}; EC=5.4.99.16 {ECO:0000313|EMBL:CBK63352.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F41200
L3_069_000M1_scaffold_595_16
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20325..21614
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D8A2C0
Histidine acid phosphatase
Histidine acid phosphatase {ECO:0000313|EMBL:AFL76667.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_069_000M1_scaffold_595_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21716..22567)
DNA (852bp) protein (284aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YJ17_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:EFR57481.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_069_000M1_scaffold_595_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22789..26547)
DNA (3759bp) protein (1253aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030BFC46
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77901.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_069_000M1_scaffold_595_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26918..27109)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DAE6B1
SSU ribosomal protein S21P
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_069_000M1_scaffold_595_20
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27198..28250)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FF986E
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EFR59139.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
DNA uptake protein and related DNA-binding proteins
L3_069_000M1_scaffold_595_21
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28250..30094)
DNA (1845bp) protein (615aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000306FC8F
Menaquinone biosynthesis decarboxylase, SCO4490 family {ECO:0000313|EMBL:EDS03575.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_069_000M1_scaffold_595_22
unknown

Not on your lists

30201..30395
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000382233F
L3_069_000M1_scaffold_595_23
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30695..32827)
DNA (2133bp) protein (711aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EFR59148.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EFR59148.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
methylmalonyl-CoA mutase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E46188
methylmalonyl-CoA mutase
L3_069_000M1_scaffold_595_24
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32840..34681)
DNA (1842bp) protein (614aa)
methylmalonyl-CoA mutase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003715C90
Heterodimeric methylmalonyl-CoA mutase small subunit {ECO:0000313|EMBL:CDC95942.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
methylmalonyl-CoA mutase, N-terminal domain/subunit
L3_069_000M1_scaffold_595_25
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35487..37643
DNA (2157bp) protein (719aa)
L-glutamine synthetase (EC:6.3.1.2)
glutamine synthetase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000366E1EA
L-glutamine synthetase {ECO:0000313|EMBL:CCZ97120.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Displaying 25 items

View Taxonomy