ggKbase home page

L3_069_000M1_scaffold_610

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_610_1
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(1..1380)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FI47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01737.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_069_000M1_scaffold_610_2

Not on your lists

comp(1400..1711)
DNA (312bp) protein (104aa)
Uncharacterized protein n=3 Tax=root RepID=R6XBS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKC50313.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_069_000M1_scaffold_610_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1846..2028)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WAA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03779.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_069_000M1_scaffold_610_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2057..3466)
DNA (1410bp) protein (470aa)
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6XBR8_9CLOT
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CDD03777.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_069_000M1_scaffold_610_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3609..4301
DNA (693bp) protein (231aa)
Two component system response regulator n=1 Tax=Clostridium sp. CAG:91 RepID=R6WAA2_9CLOT
Two component system response regulator {ECO:0000313|EMBL:CDD03774.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
two component system response regulator
L3_069_000M1_scaffold_610_6
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4304..5140
DNA (837bp) protein (279aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
two component system histidine kinase (EC:2.7.13.3)
Two component system histidine kinase n=1 Tax=Clostridium sp. CAG:91 RepID=R6XBR4_9CLOT
L3_069_000M1_scaffold_610_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5413..6372)
DNA (960bp) protein (320aa)
Serine kinase of the HPr protein regulates carbohydrate metabolism n=1 Tax=Clostridium sp. CAG:91 RepID=R6VY98_9CLOT
Serine kinase of the HPr protein regulates carbohydrate metabolism {ECO:0000313|EMBL:CDD03768.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_069_000M1_scaffold_610_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6342..8021)
DNA (1680bp) protein (560aa)
ABC transporter ATP-binding/permease protein n=2 Tax=root RepID=R6W2U2_9CLOT
ABC transporter ATP-binding/permease protein {ECO:0000313|EMBL:CDD03765.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ABC transporter ATP-binding protein/permease
L3_069_000M1_scaffold_610_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8028..8315)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VY93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03763.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_069_000M1_scaffold_610_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8558..8734)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XBQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03762.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_069_000M1_scaffold_610_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8814..9749)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WHW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03761.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_069_000M1_scaffold_610_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9746..11533)
DNA (1788bp) protein (596aa)
Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2T7_9CLOT
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:CDD03760.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_069_000M1_scaffold_610_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11536..11985)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WA88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03759.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_069_000M1_scaffold_610_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12026..13204)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VY88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03758.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_069_000M1_scaffold_610_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13223..14998)
DNA (1776bp) protein (592aa)
CotH protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XBQ0_9CLOT
CotH protein {ECO:0000313|EMBL:CDD03757.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_069_000M1_scaffold_610_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15011..16198)
DNA (1188bp) protein (396aa)
UDP-glucose 6-dehydrogenase n=2 Tax=root RepID=R6WHV7_9CLOT
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:CDD03756.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
nucleotide sugar dehydrogenase
L3_069_000M1_scaffold_610_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16170..17846)
DNA (1677bp) protein (559aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2T3_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD03755.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_069_000M1_scaffold_610_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17843..18688)
DNA (846bp) protein (282aa)
Exopolysaccharide biosynthesis pyruvyltransferase ExoV n=1 Tax=Clostridium sp. CAG:91 RepID=R6WA82_9CLOT
Exopolysaccharide biosynthesis pyruvyltransferase ExoV {ECO:0000313|EMBL:CDD03754.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
exoV; exopolysaccharide biosynthesis pyruvyltransferase ExoV
L3_069_000M1_scaffold_610_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18709..19704)
DNA (996bp) protein (332aa)
Putative glycosyltransferase n=2 Tax=root RepID=R6VY85_9CLOT
Putative glycosyltransferase {ECO:0000313|EMBL:CDD03753.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Glycosyltransferases involved in cell wall biogenesis
L3_069_000M1_scaffold_610_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19664..20845)
DNA (1182bp) protein (394aa)
Lipopolysaccharide N-acetylglucosaminyltransferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6WHV3_9CLOT
Lipopolysaccharide N-acetylglucosaminyltransferase {ECO:0000313|EMBL:CDD03751.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
lipopolysaccharide N-acetylglucosaminyltransferase
L3_069_000M1_scaffold_610_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20842..22008)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2S9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03750.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_069_000M1_scaffold_610_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22041..23435)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WA76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03749.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_069_000M1_scaffold_610_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23440..24396)
DNA (957bp) protein (319aa)
Glycosyl transferase GT2 family n=1 Tax=Clostridium sp. CAG:91 RepID=R6XBP2_9CLOT
Glycosyl transferase GT2 family {ECO:0000313|EMBL:CDD03747.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
glycosyl transferase 2
L3_069_000M1_scaffold_610_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24400..25338)
DNA (939bp) protein (313aa)
rfaG; Glycosyltransferase (EC:2.4.1.-)
Glycosyl transferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6WHU4_9CLOT
Glycosyl transferase {ECO:0000313|EMBL:CDD03741.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_069_000M1_scaffold_610_25
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25320..26123)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VY66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03733.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_069_000M1_scaffold_610_26
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26098..26643)
DNA (546bp) protein (182aa)
Glycosyltransferase family 28 C-terminal domain protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XBM3_9CLOT
Glycosyltransferase family 28 C-terminal domain protein {ECO:0000313|EMBL:CDD03727.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
EpsH protein
L3_069_000M1_scaffold_610_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26615..27067)
DNA (453bp) protein (151aa)
EpsG n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2R4_9CLOT
EpsG {ECO:0000313|EMBL:CDD03725.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
EpsG protein
L3_069_000M1_scaffold_610_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27087..28490)
DNA (1404bp) protein (468aa)
Polysaccharide export protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XBL9_9CLOT
Polysaccharide export protein {ECO:0000313|EMBL:CDD03722.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
polysaccharide export protein
L3_069_000M1_scaffold_610_29
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28992..29696
DNA (705bp) protein (235aa)
GGDEF domain-containing protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2R1_9CLOT
GGDEF domain-containing protein {ECO:0000313|EMBL:CDD03720.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
GGDEF domain-containing protein
L3_069_000M1_scaffold_610_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29729..30292
DNA (564bp) protein (188aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:91 RepID=R6XBL3_9CLOT
RNA polymerase sigma factor {ECO:0000313|EMBL:CDD03717.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
Displaying items 1-30 of 38 in total

View Taxonomy