ggKbase home page

L3_069_000M1_scaffold_638

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_638_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(394..726)
DNA (333bp) protein (111aa)
DNA-binding helix-turn-helix protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSR2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFB74268.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative transcriptional regulator
L3_069_000M1_scaffold_638_2
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(728..1492)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6U1Y8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC79698.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
hypothetical protein
L3_069_000M1_scaffold_638_3
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1543..2382)
DNA (840bp) protein (280aa)
N-acetylmuramoyl-L-alanine amidase./Putative peptidoglycan binding domain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L521_9FIRM
N-acetylmuramoyl-L-alanine amidase./Putative peptidoglycan binding domain.
N-acetylmuramoyl-L-alanine amidase./Putative peptidoglycan binding domain {ECO:0000313|EMBL:CBL14716.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_069_000M1_scaffold_638_4
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(2384..2653)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AEY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX39512.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L3_069_000M1_scaffold_638_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2656..3105)
DNA (450bp) protein (150aa)
Toxin secretion/phage lysis holin n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L520_9FIRM
toxin secretion/phage lysis holin
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:CBL14715.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_069_000M1_scaffold_638_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3110..3358)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L519_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14714.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_069_000M1_scaffold_638_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3377..4144)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82833.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L3_069_000M1_scaffold_638_8
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4128..5333)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MQ07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01773.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_069_000M1_scaffold_638_9
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5350..5751)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N0F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01774.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_069_000M1_scaffold_638_10
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5767..8688)
DNA (2922bp) protein (974aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N652_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01776.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
putative minor tail protein
L3_069_000M1_scaffold_638_11
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8812..9528)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V474_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK47553.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L3_069_000M1_scaffold_638_12
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9628..9855)
DNA (228bp) protein (76aa)
Putative phage protein n=1 Tax=Clostridium phage vB_CpeS-CP51 RepID=M9Q2I4_9CAUD
Bacteriophage Gp15 protein {ECO:0000313|EMBL:KHS56199.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
bacteriophage Gp15 family protein
L3_069_000M1_scaffold_638_13
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9933..10250)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NVN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01777.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_069_000M1_scaffold_638_14
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10273..10716)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MQ11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01778.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_069_000M1_scaffold_638_15
Bulleidia extructa, Bulleidia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10721..11113)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MPI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFC05593.1}; TaxID=679192 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia.;" source="Bulleidia extructa W1219.;"
L3_069_000M1_scaffold_638_16
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11110..11496)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01780.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_069_000M1_scaffold_638_17
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11496..11888)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N655_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01781.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_069_000M1_scaffold_638_18
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11905..12234)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NVN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01782.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_069_000M1_scaffold_638_19
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12234..13172)
DNA (939bp) protein (313aa)
Phage major capsid protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FBE8_9CLOT
Phage major capsid protein {ECO:0000313|EMBL:CDE11067.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
phage major capsid protein
L3_069_000M1_scaffold_638_20
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13196..13786)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MQ16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01783.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_069_000M1_scaffold_638_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13927..14127)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L508_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14703.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_069_000M1_scaffold_638_22
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14284..14472)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N0G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01789.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_069_000M1_scaffold_638_23
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14480..16201)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R2U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC39489.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
phage minor capsid protein
L3_069_000M1_scaffold_638_24
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16194..17801)
DNA (1608bp) protein (536aa)
Phage minor capsid protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R978_9CLOT
Phage minor capsid protein {ECO:0000313|EMBL:CDC39491.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
phage minor capsid protein
L3_069_000M1_scaffold_638_25
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17788..19149)
DNA (1362bp) protein (454aa)
Phage terminase large subunit PBSX family n=1 Tax=Clostridium sp. CAG:352 RepID=R6QSC6_9CLOT
Phage terminase large subunit PBSX family {ECO:0000313|EMBL:CDC39493.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
phage terminase, large subunit
L3_069_000M1_scaffold_638_26
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19142..19537)
DNA (396bp) protein (132aa)
Phage terminase small subunit n=1 Tax=Clostridium sp. CAG:352 RepID=R6QUI1_9CLOT
Phage terminase small subunit {ECO:0000313|EMBL:CDC39495.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
terS; Terminase small subunit
L3_069_000M1_scaffold_638_27
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19693..20088)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CF46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA74275.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
hypothetical protein
L3_069_000M1_scaffold_638_28
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20088..20711)
DNA (624bp) protein (208aa)
Protein 1 protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UN83_9CLOT
Protein 1 protein {ECO:0000313|EMBL:CDC81681.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
hypothetical protein
L3_069_000M1_scaffold_638_29
unknown

Not on your lists

comp(20854..21219)
DNA (366bp) protein (122aa)

This feature has no annotations

L3_069_000M1_scaffold_638_30
unknown

Not on your lists

comp(21216..21395)
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

View Taxonomy