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L3_069_000M1_scaffold_644

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_644_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7..1110)
DNA (1104bp) protein (368aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Chorismate synthase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E578_9FIRM
L3_069_000M1_scaffold_644_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1791..3656
DNA (1866bp) protein (622aa)
Glycosidases n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNN1_9FIRM
Glycosidases
Glycosidases {ECO:0000313|EMBL:CBK94700.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_069_000M1_scaffold_644_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3683..4825
DNA (1143bp) protein (381aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Queuine tRNA-ribosyltransferase n=3 Tax=Eubacterium RepID=C4ZAW9_EUBR3
tgt; queuine tRNA-ribosyltransferase
L3_069_000M1_scaffold_644_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4946..5257
DNA (312bp) protein (104aa)
Preprotein translocase subunit YajC n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAW8_EUBR3
preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:ACR75623.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_069_000M1_scaffold_644_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5469..6569
DNA (1101bp) protein (367aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
3-isopropylmalate dehydrogenase n=2 Tax=Eubacterium RepID=D4JNM8_9FIRM
L3_069_000M1_scaffold_644_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6684..8363
DNA (1680bp) protein (560aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000255|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000255|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000255|HAMAP-Rule:MF_00012};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Dihydroxy-acid dehydratase n=4 Tax=Eubacterium RepID=ILVD_EUBR3
L3_069_000M1_scaffold_644_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8449..10137
DNA (1689bp) protein (563aa)
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Acetolactate synthase n=2 Tax=Eubacterium rectale RepID=C4ZAW5_EUBR3
L3_069_000M1_scaffold_644_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10139..11221
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Phosphoserine aminotransferase n=2 Tax=Eubacterium RepID=C4ZAW4_EUBR3
phosphoserine aminotransferase
L3_069_000M1_scaffold_644_9
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11221..12384
DNA (1164bp) protein (388aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
Phosphoglycerate dehydrogenase and related dehydrogenases n=2 Tax=Eubacterium RepID=D6E571_9FIRM
Phosphoglycerate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CDC74554.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_069_000M1_scaffold_644_10
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12524..13435
DNA (912bp) protein (304aa)
Mechanosensitive channel protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U3C2_9FIRM
Mechanosensitive channel protein {ECO:0000313|EMBL:CDC74556.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
mechanosensitive channel protein
L3_069_000M1_scaffold_644_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13555..16473
DNA (2919bp) protein (973aa)
Zn-dependent peptidase, insulinase family n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAW1_EUBR3
Zn-dependent peptidase, insulinase family
Zn-dependent peptidase, insulinase family {ECO:0000313|EMBL:ACR75616.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_069_000M1_scaffold_644_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16498..17409
DNA (912bp) protein (304aa)
GTPase Era n=3 Tax=Eubacterium RepID=D4JNM2_9FIRM
GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_069_000M1_scaffold_644_13
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17431..18159
DNA (729bp) protein (243aa)
DNA repair protein RecO n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TXM3_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
DNA replication and repair protein RecO
L3_069_000M1_scaffold_644_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18293..19084
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAV8_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75613.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_069_000M1_scaffold_644_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19239..20636
DNA (1398bp) protein (466aa)
Glycine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00253}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00253};; Glycyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00253}; Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00253};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Glycine--tRNA ligase n=2 Tax=Eubacterium RepID=SYG_EUBR3
glycyl-tRNA synthetase
L3_069_000M1_scaffold_644_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20854..21105
DNA (252bp) protein (84aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TME5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75611.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_069_000M1_scaffold_644_17
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21153..22379
DNA (1227bp) protein (409aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Signal peptidase I bacterial type n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TQX6_9FIRM
signal peptidase I, bacterial type
L3_069_000M1_scaffold_644_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22531..26571
DNA (4041bp) protein (1347aa)
Collagen binding domain n=4 Tax=Eubacterium RepID=D4JNL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ACR75609.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Collagen binding domain.
L3_069_000M1_scaffold_644_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26589..28091
DNA (1503bp) protein (501aa)
Cna protein B-type domain./Gram positive anchor n=3 Tax=Eubacterium rectale RepID=D4JNL5_9FIRM
Cna protein B-type domain./Gram positive anchor.
Uncharacterized protein {ECO:0000313|EMBL:ACR75608.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_069_000M1_scaffold_644_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28205..29026
DNA (822bp) protein (274aa)
LPXTG-site transpeptidase (Sortase) family protein n=2 Tax=Eubacterium rectale RepID=D4JNL4_9FIRM
LPXTG-site transpeptidase (sortase) family protein
LPXTG-site transpeptidase (Sortase) family protein {ECO:0000313|EMBL:CBK90549.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_069_000M1_scaffold_644_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29045..29998
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6UV61_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94682.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_069_000M1_scaffold_644_22
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29983..30540
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TXP1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC74584.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_069_000M1_scaffold_644_23
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30540..31289
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UV62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC74587.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_069_000M1_scaffold_644_24
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31301..32041
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TXP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC74589.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_069_000M1_scaffold_644_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32025..33098
DNA (1074bp) protein (358aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TQZ6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90544.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_069_000M1_scaffold_644_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33219..35861
DNA (2643bp) protein (881aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=2 Tax=Eubacterium RepID=D6E553_9FIRM
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDC74592.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_069_000M1_scaffold_644_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36326..38404)
DNA (2079bp) protein (693aa)
Methyl-accepting chemotaxis protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E551_9FIRM
Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBK90541.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Displaying 27 items

View Taxonomy