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L3_069_000M1_scaffold_647

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_647_1
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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390..2354
DNA (1965bp) protein (655aa)
Putative uncharacterized protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q1I2_CLONN
Uncharacterized protein {ECO:0000313|EMBL:KGN02119.1}; TaxID=1444290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4570.;"
hypothetical protein
L3_069_000M1_scaffold_647_2
unknown

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comp(2338..2754)
DNA (417bp) protein (139aa)

This feature has no annotations

L3_069_000M1_scaffold_647_3
unknown

Not on your lists

comp(2992..3168)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_069_000M1_scaffold_647_4
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3168..4091)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AR48_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58170.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
Phage minor capsid protein 2.
L3_069_000M1_scaffold_647_5
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4661..8638
DNA (3978bp) protein (1326aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
CRISPR-associated endonuclease Csn1 family n=1 Tax=Clostridium sp. CAG:964 RepID=R6U7U5_9CLOT
CRISPR-associated endonuclease, Csn1 family
L3_069_000M1_scaffold_647_6
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8663..9532
DNA (870bp) protein (290aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Clostridium sp. CAG:964 RepID=R6UEW8_9CLOT
cas1; CRISPR-associated Cas1
L3_069_000M1_scaffold_647_7
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9529..9849
DNA (321bp) protein (107aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Clostridium sp. CAG:964 RepID=R6U4G8_9CLOT
CRISPR-associated Cas2
L3_069_000M1_scaffold_647_8
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9846..10511
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6VD76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC80607.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
CRISPR type II-a/nmemi-associated protein csn2
L3_069_000M1_scaffold_647_9
unknown

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comp(10744..11298)
DNA (555bp) protein (185aa)

This feature has no annotations

L3_069_000M1_scaffold_647_10
unknown

Not on your lists

comp(12137..12253)
DNA (117bp) protein (39aa)

This feature has no annotations

L3_069_000M1_scaffold_647_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12423..14090
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DU92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83728.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L3_069_000M1_scaffold_647_12
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14087..15394
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83729.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L3_069_000M1_scaffold_647_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15372..16010
DNA (639bp) protein (213aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6G1_9FIRM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CCX83731.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_069_000M1_scaffold_647_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16196..16597
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83736.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L3_069_000M1_scaffold_647_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16790..17176
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83738.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_647_16
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17193..17777
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9H6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16271.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_069_000M1_scaffold_647_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17791..19335
DNA (1545bp) protein (515aa)
Dockerin type I repeat n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6H1_9FIRM
Dockerin type I repeat {ECO:0000313|EMBL:CCX83741.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Dockerin type I repeat.
L3_069_000M1_scaffold_647_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19348..20481
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83743.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L3_069_000M1_scaffold_647_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20529..20915
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DU33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83745.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L3_069_000M1_scaffold_647_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21075..21449
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83747.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L3_069_000M1_scaffold_647_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21446..23272
DNA (1827bp) protein (609aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ-like n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUB3_9FIRM
ATP-dependent DNA helicase RecQ-like {ECO:0000313|EMBL:CCX83748.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L3_069_000M1_scaffold_647_22
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23402..24514
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9H1_9FIRM
Protein of unknown function (DUF2974).
Uncharacterized protein {ECO:0000313|EMBL:CBL16266.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_069_000M1_scaffold_647_23
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24711..25469)
DNA (759bp) protein (253aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III {ECO:0000313|EMBL:CBL16265.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CBL16265.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Exodeoxyribonuclease III n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9H0_9FIRM
L3_069_000M1_scaffold_647_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25534..25692)
DNA (159bp) protein (53aa)
Rubredoxin n=2 Tax=Ruminococcus RepID=D4L9G9_9FIRM
Rubredoxin
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071, ECO:0000313|EMBL:CBL16264.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_069_000M1_scaffold_647_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25791..26330)
DNA (540bp) protein (180aa)
Rubrerythrin n=2 Tax=Ruminococcus RepID=D4L9G8_9FIRM
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CCX83764.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L3_069_000M1_scaffold_647_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26356..26748)
DNA (393bp) protein (131aa)
Fe2+/Zn2+ uptake regulation proteins n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6J8_9FIRM
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CCX83766.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Fe2+/Zn2+ uptake regulation proteins
L3_069_000M1_scaffold_647_27
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26907..27770
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83769.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
polysaccharide deacetylase
L3_069_000M1_scaffold_647_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27774..29387)
DNA (1614bp) protein (538aa)
O-Antigen ligase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6K4_9FIRM
O-Antigen ligase {ECO:0000313|EMBL:CCX83771.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
O-Antigen ligase.
L3_069_000M1_scaffold_647_29
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29694..30344
DNA (651bp) protein (217aa)
Predicted phosphatases (EC:3.1.3.18)
Predicted phosphatases {ECO:0000313|EMBL:CBL16260.1}; EC=3.1.3.18 {ECO:0000313|EMBL:CBL16260.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Predicted phosphatases n=2 Tax=Ruminococcus RepID=D4L9G5_9FIRM
L3_069_000M1_scaffold_647_30
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30913..32601
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N3I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02849.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
sig1; RNA polymerase sigma factor
Displaying items 1-30 of 31 in total

View Taxonomy