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L3_069_000M1_scaffold_653

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_653_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..514)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000306C0BD
Uncharacterized protein {ECO:0000313|EMBL:CDD25639.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
SusD family.
L3_069_000M1_scaffold_653_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(540..3803)
DNA (3264bp) protein (1088aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036BC9EF
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD25640.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
TonB-linked outer membrane protein, SusC/RagA family
L3_069_000M1_scaffold_653_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3837..6287)
DNA (2451bp) protein (817aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000362B10D
Putative lipoprotein {ECO:0000313|EMBL:CDD25641.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_069_000M1_scaffold_653_4
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6640..7914)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030EC52E
Uncharacterized protein {ECO:0000313|EMBL:CCZ07346.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
regulatory protein
L3_069_000M1_scaffold_653_5
unknown

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comp(8211..8336)
DNA (126bp) protein (42aa)

This feature has no annotations

L3_069_000M1_scaffold_653_6
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8447..9235)
DNA (789bp) protein (263aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes (EC:3.6.1.13)
NTP pyrophosphohydrolases including oxidative damage repair enzymes {ECO:0000313|EMBL:CBK63769.1}; EC=3.6.1.13 {ECO:0000313|EMBL:CBK63769.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DE108A
L3_069_000M1_scaffold_653_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9340..10644
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003684003
hypothetical protein
UPF0597 protein Alfi_0261 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_069_000M1_scaffold_653_8
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10687..11016)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030F8BB9
Quaternary ammonium compounds resistance protein Qac {ECO:0000313|EMBL:CDB36046.1}; TaxID=1262915 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:266.;"
Spermidine export protein mdtJ
L3_069_000M1_scaffold_653_9

Not on your lists

comp(11393..11938)
DNA (546bp) protein (182aa)
peptide deformylase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E22A96
Peptide deformylase {ECO:0000313|EMBL:EKC77624.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
peptide deformylase
L3_069_000M1_scaffold_653_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12064..12492)
DNA (429bp) protein (143aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000380A5DE
RNAse H-fold protein YqgF
L3_069_000M1_scaffold_653_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12601..14145)
DNA (1545bp) protein (515aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
glycyl-tRNA synthetease n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036674A4
L3_069_000M1_scaffold_653_12
unknown

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14917..15465
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002ECE148
L3_069_000M1_scaffold_653_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15520..16203)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031F5789
DNA repair protein RadC {ECO:0000313|EMBL:EFR56617.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
DNA repair protein radc
L3_069_000M1_scaffold_653_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16203..16994)
DNA (792bp) protein (264aa)
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031D489C
L3_069_000M1_scaffold_653_15
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17006..18253)
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-ACP synthase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000362B9AC
L3_069_000M1_scaffold_653_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18313..18549)
DNA (237bp) protein (79aa)
acyl carrier protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003051F47
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acyl carrier protein
L3_069_000M1_scaffold_653_17
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18728..19429
DNA (702bp) protein (234aa)
(alpha)-aspartyl dipeptidase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003754BE8
Peptidase E {ECO:0000313|EMBL:CDC99452.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
peptidase E
L3_069_000M1_scaffold_653_18
Prevotella sp. CAG:1124, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19444..19950
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030A39A1
Uncharacterized protein {ECO:0000313|EMBL:CCY66208.1}; TaxID=1262920 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1124.;"
hypothetical protein
L3_069_000M1_scaffold_653_19
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19954..20796
DNA (843bp) protein (281aa)
Prephenate dehydrogenase (EC:1.3.1.12)
prephenate dehydrogenase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DC0A82
Prephenate dehydrogenase {ECO:0000313|EMBL:CCZ95928.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_069_000M1_scaffold_653_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20793..21164
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000302C4A5
UPF0102 protein BN590_01358 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
endonuclease
L3_069_000M1_scaffold_653_21
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21223..22452
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037D08A4
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:CDC99449.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
3-deoxy-D-manno-octulosonic-acid transferase
L3_069_000M1_scaffold_653_22
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22550..24289)
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036483E5
Peptidase M23 family {ECO:0000313|EMBL:CDE64272.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
metalloendopeptidase-like membrane protein
L3_069_000M1_scaffold_653_23
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24271..24795)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E91675
hypothetical protein
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_069_000M1_scaffold_653_24
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24774..25619)
DNA (846bp) protein (282aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030C074F
protein-(glutamine-N5) methyltransferase
L3_069_000M1_scaffold_653_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25598..26596)
DNA (999bp) protein (333aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FB01EA
L3_069_000M1_scaffold_653_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26814..28061)
DNA (1248bp) protein (416aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000381BF79
L3_069_000M1_scaffold_653_27
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28125..28949)
DNA (825bp) protein (275aa)
ABC transporter ATP-binding protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030E340A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE64265.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
ABC transporter ATPase
L3_069_000M1_scaffold_653_28
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29044..31239
DNA (2196bp) protein (732aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EFR56610.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFR56610.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
ATP-dependent DNA helicase RecQ n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000368F46D
ATP-dependent DNA helicase RecQ
L3_069_000M1_scaffold_653_29
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31445..32116
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003703B28
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CCZ96210.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Lysophospholipase L1 and related esterases
L3_069_000M1_scaffold_653_30
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32200..33252
DNA (1053bp) protein (351aa)
Linear amide C-N hydrolase, choloylglycine hydrolase family protein {ECO:0000313|EMBL:EFA18916.1}; EC=3.5.1.- {ECO:0000313|EMBL:EFA18916.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F95F26
choloylglycine hydrolase
Displaying items 1-30 of 32 in total

View Taxonomy