ggKbase home page

L3_069_000M1_scaffold_677

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_677_1
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(701..1030)
DNA (330bp) protein (110aa)
Uncharacterized protein n=3 Tax=Megasphaera RepID=S7J6C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP14185.1}; Flags: Fragment;; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
transposase
L3_069_000M1_scaffold_677_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1299..2411)
DNA (1113bp) protein (371aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSA6_9FIRM
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:CCY32610.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L3_069_000M1_scaffold_677_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2414..3394)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32612.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L3_069_000M1_scaffold_677_4
Parvimonas sp. oral taxon 393, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3433..4638)
DNA (1206bp) protein (402aa)
Phosphoribosylamine--glycine ligase-like protein n=1 Tax=Parvimonas sp. oral taxon 393 str. F0440 RepID=F9PPC2_9FIRM
Phosphoribosylamine--glycine ligase-like protein {ECO:0000313|EMBL:EGV11124.1}; TaxID=944565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 393 str. F0440.;"
carbamoyl-phosphate-synthetase
L3_069_000M1_scaffold_677_5
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4657..6087)
DNA (1431bp) protein (477aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. CAG:780 RepID=R5QBD1_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CCZ18442.1}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
polysaccharide biosynthesis protein
L3_069_000M1_scaffold_677_6
Selenomonas sputigena, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6103..7041)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28) RepID=C9LXU0_SELS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEX76473.1}; TaxID=546271 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28).;"
L3_069_000M1_scaffold_677_7
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7882..8826)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I259_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE45561.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
lipopolysaccharide biosynthesis protein
L3_069_000M1_scaffold_677_8
Lactobacillus plantarum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8823..9707)
DNA (885bp) protein (295aa)
Putative glycosyltransferase n=1 Tax=Lactobacillus plantarum ZJ316 RepID=S5SYZ9_LACPN
Putative glycosyltransferase
Plasmid pLP-ZJ102, complete sequence {ECO:0000313|EMBL:AGS26704.1}; TaxID=1284663 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus plantarum ZJ316.;"
L3_069_000M1_scaffold_677_9
Planococcus donghaensis, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9756..10808)
DNA (1053bp) protein (351aa)
Glycosyl transferase group 1 n=1 Tax=Planococcus donghaensis MPA1U2 RepID=E7RDS1_9BACL
Glycosyl transferase group 1 {ECO:0000313|EMBL:EGA90827.1}; TaxID=933115 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus donghaensis MPA1U2.;"
glycosyltransferase
L3_069_000M1_scaffold_677_10
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10931..11776)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UJN9_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU23885.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_069_000M1_scaffold_677_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11788..13458)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15728.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
UBA/THIF-type NAD/FAD binding protein
L3_069_000M1_scaffold_677_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13451..14482)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15729.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_069_000M1_scaffold_677_13
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14740..15867)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N0B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF06260.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
group 1 glycosyl transferase
L3_069_000M1_scaffold_677_14
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15883..17265)
DNA (1383bp) protein (461aa)
Undecaprenyl-phosphate galactosephosphotransferase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VNK7_MEGEL
undecaprenyl-phosphate galactosephosphotransferase
Undecaprenyl-phosphate galactosephosphotransferase {ECO:0000313|EMBL:CCC73035.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_677_15
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17425..17901)
DNA (477bp) protein (159aa)
Hydrolase n=1 Tax=Megasphaera sp. NM10 RepID=S7IWW5_9FIRM
Hydrolase {ECO:0000313|EMBL:EPP14460.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hydrolase
L3_069_000M1_scaffold_677_16
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17906..18340)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HPJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP14461.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L3_069_000M1_scaffold_677_17
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19224..19562)
DNA (339bp) protein (113aa)
50S ribosomal protein L17 n=4 Tax=Megasphaera RepID=G0VNJ7_MEGEL
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_677_18
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19580..20560)
DNA (981bp) protein (327aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Megasphaera RepID=S7HFJ9_9FIRM
DNA-directed RNA polymerase
L3_069_000M1_scaffold_677_19
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(20613..21002)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=4 Tax=Megasphaera RepID=G0VNJ5_MEGEL
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:CCC73023.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_677_20
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(21031..21399)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=2 Tax=Megasphaera RepID=G0VNJ4_MEGEL
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:CCC73022.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_677_21
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21422..21535)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Megasphaera RepID=S7HPI8_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
50S ribosomal protein L36
L3_069_000M1_scaffold_677_22
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21559..21777)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=4 Tax=Megasphaera RepID=G0VNJ2_MEGEL
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L3_069_000M1_scaffold_677_23
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21792..22061)
DNA (270bp) protein (90aa)
Uncharacterized protein n=4 Tax=Megasphaera RepID=R7MWJ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPP14468.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L3_069_000M1_scaffold_677_24
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22063..22815)
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Methionine aminopeptidase n=2 Tax=Megasphaera RepID=S7HG00_9FIRM
methionine aminopeptidase
L3_069_000M1_scaffold_677_25
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22818..23468)
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Adenylate kinase n=4 Tax=Megasphaera RepID=G0VNI9_MEGEL
adenylate kinase
L3_069_000M1_scaffold_677_26
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(23485..24747)
DNA (1263bp) protein (421aa)
Protein translocase subunit SecY n=2 Tax=Megasphaera RepID=S7HPI3_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
preprotein translocase subunit secY
L3_069_000M1_scaffold_677_27
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(24760..25224)
DNA (465bp) protein (155aa)
50S ribosomal protein L15 n=2 Tax=Megasphaera RepID=G0VNI7_MEGEL
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_677_28
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(25246..25425)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=4 Tax=Megasphaera RepID=G0VNI6_MEGEL
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_000M1_scaffold_677_29
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(25444..25944)
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=2 Tax=Megasphaera RepID=S7HG05_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
30S ribosomal protein S5
L3_069_000M1_scaffold_677_30
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(25963..26325)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=4 Tax=Megasphaera RepID=G0VNI4_MEGEL
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000313|EMBL:CCC73012.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Displaying items 1-30 of 47 in total

View Taxonomy