ggKbase home page

L3_069_000M1_scaffold_682

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_682_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..109
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEK2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS27975.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_069_000M1_scaffold_682_2
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


203..472
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=12 Tax=Bacteroides RepID=RS15_BACV8
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_069_000M1_scaffold_682_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(575..1060)
DNA (486bp) protein (162aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
S-ribosylhomocysteine lyase n=2 Tax=Bacteroides RepID=E5UPD8_9BACE
S-ribosylhomocysteinase
L3_069_000M1_scaffold_682_4
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1131..1616)
DNA (486bp) protein (162aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=5 Tax=Bacteroides RepID=A6KYS5_BACV8
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
L3_069_000M1_scaffold_682_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1701..4193
DNA (2493bp) protein (831aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6Z0B9_9BACE
Bacterial membrane YfhO family protein {ECO:0000313|EMBL:KDS27971.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_069_000M1_scaffold_682_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4219..4965)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZTY2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY78572.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
glycosyl transferase family protein
L3_069_000M1_scaffold_682_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4958..6220)
DNA (1263bp) protein (421aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EET14339.2}; EC=2.4.-.- {ECO:0000313|EMBL:EET14339.2};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glycosyltransferase family 4 n=6 Tax=root RepID=A6KYS2_BACV8
glycosyl transferase family protein
L3_069_000M1_scaffold_682_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6233..7348)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6KYS1_BACV8
glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:ABR38585.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_069_000M1_scaffold_682_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7321..8337)
DNA (1017bp) protein (339aa)
Hemolysin hemolytic protein n=4 Tax=Bacteroides vulgatus RepID=A6KYS0_BACV8
hemolysin hemolytic protein
Putative methyltransferase FkbM {ECO:0000313|EMBL:KDS27967.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_069_000M1_scaffold_682_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8478..9041)
DNA (564bp) protein (188aa)
Lipopolysaccharide cholinephosphotransferase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H3X2_BACVU
cholinephosphotransferase
Putative cholinephosphotransferase {ECO:0000313|EMBL:ABR38583.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_069_000M1_scaffold_682_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9045..10145)
DNA (1101bp) protein (367aa)
Octopine dehydrogenase n=2 Tax=Bacteroides vulgatus RepID=A6KYR8_BACV8
octopine dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:EIY78577.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_069_000M1_scaffold_682_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10142..11947)
DNA (1806bp) protein (602aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EET14344.1}; EC=2.6.1.- {ECO:0000313|EMBL:EET14344.1};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Aminotransferase, class I/II n=2 Tax=root RepID=C6Z0C6_9BACE
hemolysin erythrocyte lysis protein 2
L3_069_000M1_scaffold_682_13
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12038..12868
DNA (831bp) protein (277aa)
Glycosyltransferase family 23 n=5 Tax=root RepID=A6KYR6_BACV8
glycosyl transferase family protein
Uncharacterized protein {ECO:0000313|EMBL:EET14345.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_069_000M1_scaffold_682_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12891..13916)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z0C8_9BACE
Acyltransferase family protein {ECO:0000313|EMBL:KDS27962.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
transporter
L3_069_000M1_scaffold_682_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13916..15352)
DNA (1437bp) protein (479aa)
Lipopolysaccharide biosynthesis protein n=2 Tax=Bacteroides PF0_9BACE">RepID=E5UPF0_9BACE
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:KDS27961.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
lipopolysaccharide biosynthesis protein
L3_069_000M1_scaffold_682_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15434..17476)
DNA (2043bp) protein (681aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Methionine--tRNA ligase n=3 Tax=Bacteroides vulgatus RepID=SYM_BACV8
L3_069_000M1_scaffold_682_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17763..17930
DNA (168bp) protein (56aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z0D1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY78583.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_069_000M1_scaffold_682_18
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17932..19470)
DNA (1539bp) protein (513aa)
Magnesium chelatase, subunit ChlI n=5 Tax=Bacteroides RepID=A6KYR2_BACV8
magnesium chelatase subunit ChlI
Mg chelatase-like protein {ECO:0000313|EMBL:EET14350.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_069_000M1_scaffold_682_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19475..20542)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z0D3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET14351.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_069_000M1_scaffold_682_20
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20696..22372)
DNA (1677bp) protein (559aa)
Plasminogen binding protein n=2 Tax=Bacteroides PF5_9BACE">RepID=E5UPF5_9BACE
Plasminogen binding protein {ECO:0000313|EMBL:EFV68881.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
plasminogen binding protein
L3_069_000M1_scaffold_682_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22514..23455)
DNA (942bp) protein (314aa)
Tyrosine recombinase XerC n=7 Tax=Bacteroides RepID=A6KYQ9_BACV8
integrase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_069_000M1_scaffold_682_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23522..23944
DNA (423bp) protein (141aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
3-dehydroquinate dehydratase n=3 Tax=Bacteroides RepID=A6KYQ8_BACV8
L3_069_000M1_scaffold_682_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23977..25440
DNA (1464bp) protein (488aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Pyruvate kinase n=14 Tax=Bacteroides RepID=A6KYQ7_BACV8
L3_069_000M1_scaffold_682_24
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25456..26094
DNA (639bp) protein (213aa)
O-methyltransferase n=6 Tax=Bacteroides RepID=A6KYQ6_BACV8
O-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:EFV68885.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_069_000M1_scaffold_682_25
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26168..26503
DNA (336bp) protein (112aa)
Ribosome-binding factor A n=15 Tax=root RepID=A6KYQ5_BACV8
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000313|EMBL:EEO59985.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_069_000M1_scaffold_682_26
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26513..27751
DNA (1239bp) protein (413aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KYQ4_BACV8
hypothetical protein
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EET14358.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_069_000M1_scaffold_682_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28138..29010)
DNA (873bp) protein (291aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
pyridoxamine kinase (EC:2.7.1.35)
Pyridoxine kinase n=5 Tax=Bacteroides RepID=A6KYQ3_BACV8
L3_069_000M1_scaffold_682_28
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29067..29939)
DNA (873bp) protein (291aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glutamate racemase n=3 Tax=Bacteroides RepID=C3RA01_9BACE
glutamate racemase
L3_069_000M1_scaffold_682_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30015..30518)
DNA (504bp) protein (168aa)
Outer membrane protein n=7 Tax=Bacteroides RepID=C6Z0E3_9BACE
outer membrane protein OmpH
Outer membrane family protein {ECO:0000313|EMBL:KDS27947.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_069_000M1_scaffold_682_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30576..31091)
DNA (516bp) protein (172aa)
Cationic outer membrane protein n=2 Tax=Bacteroides vulgatus RepID=A6KYQ0_BACV8
cationic outer membrane protein
Cationic outer membrane protein {ECO:0000313|EMBL:ABR38564.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Displaying items 1-30 of 43 in total

View Taxonomy