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L3_069_000M1_scaffold_683

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_683_1
unknown

Not on your lists

3..1166
DNA (1164bp) protein (388aa)

This feature has no annotations

L3_069_000M1_scaffold_683_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1163..1351
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M9B1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54534.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_069_000M1_scaffold_683_3
unknown

Not on your lists

1364..1561
DNA (198bp) protein (66aa)

This feature has no annotations

L3_069_000M1_scaffold_683_4

Not on your lists

1581..3104
DNA (1524bp) protein (508aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1UZT6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC77066.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Phage-related protein, tail component
L3_069_000M1_scaffold_683_5
unknown

Not on your lists

3118..3342
DNA (225bp) protein (75aa)

This feature has no annotations

L3_069_000M1_scaffold_683_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3427..4839
DNA (1413bp) protein (471aa)
Glycosyl hydrolase family 25 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR98_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EFB74800.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycoside Hydrolase Family 25 protein
L3_069_000M1_scaffold_683_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4842..5093
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RUH1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJF38521.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_069_000M1_scaffold_683_8

Not on your lists

5126..5401
DNA (276bp) protein (92aa)
Holin n=1 Tax=human gut metagenome RepID=K1TB29_9ZZZZ
Holin {ECO:0000313|EMBL:EKC64659.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_069_000M1_scaffold_683_9
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5486..5716)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IXC1_9FIRM
putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS26503.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L3_069_000M1_scaffold_683_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6511..7620)
DNA (1110bp) protein (370aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DVL1_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:EOQ39521.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Site-specific recombinase XerD
L3_069_000M1_scaffold_683_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7803..8468)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72285.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
NYN domain protein
L3_069_000M1_scaffold_683_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8803..9591)
DNA (789bp) protein (263aa)
polC; DNA polymerase III PolC (EC:2.7.7.7)
Exonuclease n=1 Tax=Clostridium sp. CAG:226 RepID=R5B344_9CLOT
Exonuclease {ECO:0000313|EMBL:CCX49698.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_069_000M1_scaffold_683_13
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9600..10238)
DNA (639bp) protein (213aa)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) (EC:3.4.21.88)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=1 Tax=Clostridium sp. CAG:169 RepID=R6BNN2_9CLOT
SOS-response transcriptional repressors (RecA-mediated autopeptidases) {ECO:0000313|EMBL:CDA62574.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_069_000M1_scaffold_683_14
Anoxybacillus sp. BCO1, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10394..10591
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Anoxybacillus sp. SK3-4 RepID=T0BAF1_9BACI
HTH-type transcriptional regulator Xre {ECO:0000313|EMBL:KHF27819.1}; TaxID=1548750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus sp. BCO1.;"
putative Phage repressor
L3_069_000M1_scaffold_683_15
unknown

Not on your lists

comp(10764..11081)
DNA (318bp) protein (106aa)

This feature has no annotations

L3_069_000M1_scaffold_683_16
unknown

Not on your lists

11162..11374
DNA (213bp) protein (71aa)

This feature has no annotations

L3_069_000M1_scaffold_683_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11395..12093
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76043.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_069_000M1_scaffold_683_18
unknown

Not on your lists

12080..12634
DNA (555bp) protein (185aa)

This feature has no annotations

L3_069_000M1_scaffold_683_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12619..13197
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76045.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_069_000M1_scaffold_683_20
unknown

Not on your lists

13184..13393
DNA (210bp) protein (70aa)

This feature has no annotations

L3_069_000M1_scaffold_683_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13368..13664
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76046.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_069_000M1_scaffold_683_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13677..14051
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76048.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_069_000M1_scaffold_683_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14070..14810
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76049.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_069_000M1_scaffold_683_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14810..15262
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJS6_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
single-strand binding protein
L3_069_000M1_scaffold_683_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15354..16124
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76051.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative phage associated protein
L3_069_000M1_scaffold_683_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16134..17456
DNA (1323bp) protein (441aa)
DnaB-like helicase C-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNB9_9FIRM
DnaB-like helicase C-terminal domain protein {ECO:0000313|EMBL:EFB76054.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
replicative DNA helicase
L3_069_000M1_scaffold_683_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17489..18277
DNA (789bp) protein (263aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNC0_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EFB76055.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Cobyrinic acid ac-diamide synthase
L3_069_000M1_scaffold_683_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18281..19675
DNA (1395bp) protein (465aa)
ParB-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNC3_9FIRM
ParB-like protein {ECO:0000313|EMBL:EFB76058.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_069_000M1_scaffold_683_29
unknown

Not on your lists

19678..19836
DNA (159bp) protein (53aa)

This feature has no annotations

L3_069_000M1_scaffold_683_30
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19833..20264
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VPD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92628.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
Displaying items 1-30 of 46 in total

View Taxonomy