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L3_069_000M1_scaffold_726

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_726_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1355)
DNA (1353bp) protein (451aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Inosine-5'-monophosphate dehydrogenase n=16 Tax=Bifidobacterium RepID=IMDH_BIFLO
guaB; inosine-5'-monophosphate dehydrogenase
L3_069_000M1_scaffold_726_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1408..2691)
DNA (1284bp) protein (428aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase (EC:2.7.8.-)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase n=13 Tax=Bifidobacterium RepID=B3DR60_BIFLD
Putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase {ECO:0000313|EMBL:BAP84131.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_069_000M1_scaffold_726_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2688..3362)
DNA (675bp) protein (225aa)
Sua5/YciO/YrdC/YwlC family protein n=14 Tax=Bifidobacterium RepID=F8AT44_BIFLN
hypothetical protein
Putative translation factor {ECO:0000313|EMBL:ACD99342.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_069_000M1_scaffold_726_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3537..4214
DNA (678bp) protein (226aa)
Acetyltransferase n=16 Tax=Bifidobacterium RepID=B3DR58_BIFLD
acetyltransferase
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EEI80813.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_069_000M1_scaffold_726_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4346..5050)
DNA (705bp) protein (235aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=3 Tax=Bifidobacterium longum RepID=F8AT42_BIFLN
branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEI96932.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_069_000M1_scaffold_726_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5050..5910)
DNA (861bp) protein (287aa)
ABC-type branched-chain amino acid transport systems ATPase component n=17 Tax=Bifidobacterium RepID=B3DR56_BIFLD
branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:EIJ26833.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_069_000M1_scaffold_726_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5907..6995)
DNA (1089bp) protein (363aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) n=15 Tax=Bifidobacterium RepID=D6DBR7_BIFLN
branched-chain amino acid ABC transporter permease
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:CCK35501.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L3_069_000M1_scaffold_726_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7000..7926)
DNA (927bp) protein (309aa)
Branched-chain amino acid ABC-type transport system permease component n=15 Tax=Bifidobacterium RepID=B3DR54_BIFLD
branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EIJ26838.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_069_000M1_scaffold_726_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8168..9355)
DNA (1188bp) protein (396aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AT38_BIFLN
branched-chain amino acid ABC transporter substrate-binding protein
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AEI96928.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_069_000M1_scaffold_726_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9628..10536)
DNA (909bp) protein (303aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Release factor glutamine methyltransferase n=2 Tax=Bifidobacterium longum RepID=C5EBI9_BIFLI
methylase
L3_069_000M1_scaffold_726_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10599..11687)
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=15 Tax=Bifidobacterium RepID=RF1_BIFLO
prfA; prfa
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_069_000M1_scaffold_726_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11841..12053)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=26 Tax=Bifidobacterium RepID=RL31_BIFLD
rpmE2; LSU ribosomal protein L31P
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_069_000M1_scaffold_726_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12382..13611)
DNA (1230bp) protein (410aa)
NagC-type Transcriptional regulator n=17 Tax=Bifidobacterium RepID=B3DR49_BIFLD
Transcriptional regulator/sugar kinase
ROK family protein {ECO:0000313|EMBL:EIJ26845.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_069_000M1_scaffold_726_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13831..15351
DNA (1521bp) protein (507aa)
Xylulose kinase n=4 Tax=Bifidobacterium RepID=F8AT32_BIFLN
xylulokinase
Xylulose kinase {ECO:0000313|EMBL:KHD95673.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_069_000M1_scaffold_726_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15399..15524
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GVI1_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44868.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_069_000M1_scaffold_726_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15545..15925
DNA (381bp) protein (127aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=C2GVI0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44172.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_069_000M1_scaffold_726_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15901..16245
DNA (345bp) protein (115aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=V6Y2I7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95520.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_069_000M1_scaffold_726_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16508..16690)
DNA (183bp) protein (61aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=B3DR45_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95519.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_069_000M1_scaffold_726_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16881..18860)
DNA (1980bp) protein (660aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C5EBI0_BIFLI
Membrane protein {ECO:0000313|EMBL:KEY21553.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
xylosidase
L3_069_000M1_scaffold_726_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18923..19555)
DNA (633bp) protein (211aa)
Acetyltransferase n=8 Tax=Bifidobacterium longum RepID=B3DR42_BIFLD
sugar acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:KEY21552.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_069_000M1_scaffold_726_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19628..21400)
DNA (1773bp) protein (591aa)
Glycoside hydrolase n=2 Tax=Bifidobacterium longum RepID=F8AT26_BIFLN
glycoside hydrolase
Putative glycoside hydrolase {ECO:0000313|EMBL:BAJ71758.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_069_000M1_scaffold_726_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21477..23096)
DNA (1620bp) protein (540aa)
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:EIJ28371.1}; EC=3.2.1.37 {ECO:0000313|EMBL:EIJ28371.1};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Glycosyl hydrolase, family 43 n=3 Tax=Bifidobacterium longum RepID=C5EBH7_BIFLI
xynB4; beta-xylosidase
L3_069_000M1_scaffold_726_23
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23212..24108)
DNA (897bp) protein (299aa)
Sugar ABC transporter permease n=8 Tax=Bifidobacterium RepID=F8AT24_BIFLN
sugar ABC transporter permease
Putative sugar ABC transporter permease component {ECO:0000313|EMBL:CCY96146.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_069_000M1_scaffold_726_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24105..25157)
DNA (1053bp) protein (351aa)
MalF-type ABC sugar transport systems permease component n=9 Tax=Bifidobacterium RepID=B3DR37_BIFLD
MalF-type ABC sugar transport systems permease component
Putative ABC transporter permease component {ECO:0000313|EMBL:BAJ71761.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_069_000M1_scaffold_726_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25251..26564)
DNA (1314bp) protein (438aa)
Putative sugar ABC transporter substrate binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MVG8_BIFL1
sugar ABC transporter substrate-binding protein
Putative sugar ABC transporter substrate binding component {ECO:0000313|EMBL:BAJ71762.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_069_000M1_scaffold_726_26
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26900..27943
DNA (1044bp) protein (348aa)
LacI family transcriptional regulator n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XX07_9BIFI
transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:EFV37850.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_069_000M1_scaffold_726_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27952..29151)
DNA (1200bp) protein (400aa)
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family n=5 Tax=Bifidobacterium RepID=D6DBT4_BIFLN
alcohol dehydrogenase
Oxidoreductase {ECO:0000313|EMBL:KHD95663.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_069_000M1_scaffold_726_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29507..30856)
DNA (1350bp) protein (450aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Xylose isomerase n=2 Tax=Bifidobacterium RepID=E5XX09_9BIFI
xylA; xylose isomerase
L3_069_000M1_scaffold_726_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31129..31362
DNA (234bp) protein (78aa)
Major Facilitator Superfamily n=11 Tax=Bifidobacterium RepID=D6DBT6_BIFLN
permease
Uncharacterized protein {ECO:0000313|EMBL:EEI80794.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_069_000M1_scaffold_726_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31397..31699
DNA (303bp) protein (101aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=C5EBG8_BIFLI
permease
Permease {ECO:0000313|EMBL:KEY21543.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Displaying items 1-30 of 31 in total

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