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L3_069_000M1_scaffold_765

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_765_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

254..646
DNA (393bp) protein (131aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=B3DRW6_BIFLD
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AIW43806.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_069_000M1_scaffold_765_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(931..2289)
DNA (1359bp) protein (453aa)
Na+ driven multidrug efflux pump n=1 Tax=Bifidobacterium longum E18 RepID=V6XYU7_BIFLN
MATE efflux family protein {ECO:0000313|EMBL:KFI68051.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
MATE efflux family protein
L3_069_000M1_scaffold_765_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2293..3849)
DNA (1557bp) protein (519aa)
Putative transcriptional regulator n=3 Tax=Bifidobacterium longum RepID=B3DRW4_BIFLD
Putative transcriptional regulator {ECO:0000313|EMBL:ACD97883.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
bifunctional HTH-domain containing protein/aminotransferase
L3_069_000M1_scaffold_765_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3960..4811)
DNA (852bp) protein (284aa)
Cof-like hydrolase n=5 Tax=Bifidobacterium longum RepID=I3AQI9_BIFLN
had superfamily hydrolase
Cof-like hydrolase {ECO:0000313|EMBL:EIJ26724.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_069_000M1_scaffold_765_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4808..5758)
DNA (951bp) protein (317aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L-lactate dehydrogenase n=5 Tax=Bifidobacterium longum RepID=B3DRW2_BIFLD
L-2-hydroxyisocaproate/malate/lactate dehydrogenase-like protein
L3_069_000M1_scaffold_765_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5860..6108)
DNA (249bp) protein (83aa)
Preprotein translocase subunit n=20 Tax=Bifidobacterium RepID=B3DRW1_BIFLD
Protein translocase subunit secG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KEY22608.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_069_000M1_scaffold_765_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6172..6975)
DNA (804bp) protein (268aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Triosephosphate isomerase n=15 Tax=Bifidobacterium RepID=TPIS_BIFLD
triosephosphate isomerase
L3_069_000M1_scaffold_765_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7032..8294)
DNA (1263bp) protein (421aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Phosphoglycerate kinase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E1M7_BIFBR
L3_069_000M1_scaffold_765_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8406..9356)
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=16 Tax=Bifidobacterium RepID=WHIA_BIFLD
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_069_000M1_scaffold_765_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9555..10541)
DNA (987bp) protein (329aa)
UPF0042 nucleotide-binding protein BLD_0430 n=7 Tax=Bifidobacterium longum RepID=Y430_BIFLD
hypothetical protein
Nucleotide-binding protein BLGT_05625 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_069_000M1_scaffold_765_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10541..11512)
DNA (972bp) protein (324aa)
Shikimate dehydrogenase substrate binding domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GXF7_BIFLN
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:EEI80136.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
shikimate 5-dehydrogenase
L3_069_000M1_scaffold_765_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11621..13987)
DNA (2367bp) protein (789aa)
UvrABC system protein C n=5 Tax=Bifidobacterium RepID=F8AQ69_BIFLN
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
uvrC; excinuclease ABC subunit C
L3_069_000M1_scaffold_765_13
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14137..17157)
DNA (3021bp) protein (1007aa)
UvrABC system protein A n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MZA3_9BIFI
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
uvrA; excinuclease ABC subunit A
L3_069_000M1_scaffold_765_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17437..18003)
DNA (567bp) protein (189aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=Q8G6E2_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24520.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_069_000M1_scaffold_765_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18170..19363)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6Y1E9_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:ESV33674.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L3_069_000M1_scaffold_765_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19428..22976)
DNA (3549bp) protein (1183aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3E3U3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY33003.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L3_069_000M1_scaffold_765_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22973..23647)
DNA (675bp) protein (225aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=S3DK59_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97458.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_069_000M1_scaffold_765_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23644..25263)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=S3EKV3_BIFLN
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66781.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
hypothetical protein
L3_069_000M1_scaffold_765_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25475..26122
DNA (648bp) protein (216aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=C5ECH2_BIFLI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66782.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_069_000M1_scaffold_765_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26122..26823
DNA (702bp) protein (234aa)
ABC-type cobalt transport system permease component n=16 Tax=Bifidobacterium RepID=B3DRU7_BIFLD
ABC transporter permease
ABC-type cobalt transport system permease component {ECO:0000313|EMBL:ACD97866.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_069_000M1_scaffold_765_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26823..28436
DNA (1614bp) protein (538aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=4 Tax=Bifidobacterium longum RepID=D6DD95_BIFLN
cbiO2; cbio2
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ55714.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_069_000M1_scaffold_765_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28433..29104
DNA (672bp) protein (224aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DRU5_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY22592.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_069_000M1_scaffold_765_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29157..29525)
DNA (369bp) protein (123aa)
Uncharacterized protein conserved in bacteria n=14 Tax=Bifidobacterium RepID=D6DD93_BIFLN
hypothetical protein
Possibl zinc metallo-peptidase {ECO:0000313|EMBL:EIJ27431.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_069_000M1_scaffold_765_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29596..30303)
DNA (708bp) protein (236aa)
Short-chain alcohol dehydrogenase n=9 Tax=Bifidobacterium longum RepID=B3DRU3_BIFLD
dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:KEY33011.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_069_000M1_scaffold_765_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30347..31948)
DNA (1602bp) protein (534aa)
ABC-type transporter ATPase component n=17 Tax=Bifidobacterium RepID=B3DRU2_BIFLD
ABC transporter ATP-binding protein
ATP binding protein of ABC transporter {ECO:0000313|EMBL:AAN24509.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_069_000M1_scaffold_765_26
unknown

Not on your lists

32044..32109
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 26 items

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