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L3_069_000M1_scaffold_815

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_815_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(196..831)
DNA (636bp) protein (212aa)
SagB-type dehydrogenase domain protein n=3 Tax=Parabacteroides RepID=A7ADK9_9PORP
SagB-type dehydrogenase domain protein {ECO:0000313|EMBL:EDN87151.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_815_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1014..3581
DNA (2568bp) protein (856aa)
TonB-dependent receptor n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XCM7_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:CDD14091.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-dependent receptor
L3_069_000M1_scaffold_815_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3768..4526
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B5A2_9PORP
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDN87149.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Beta-galactosidase/beta-glucuronidase
L3_069_000M1_scaffold_815_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4468..5721
DNA (1254bp) protein (418aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B5A2_9PORP
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CDD14090.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Beta-galactosidase/beta-glucuronidase
L3_069_000M1_scaffold_815_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5823..7409)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X4P3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14089.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Arylsulfatase A and related enzymes
L3_069_000M1_scaffold_815_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7611..9326)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WS02_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14088.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RagB/SusD domain protein
L3_069_000M1_scaffold_815_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9340..12576)
DNA (3237bp) protein (1079aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y6Q1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14087.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-dependent receptor plug
L3_069_000M1_scaffold_815_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13667..15595
DNA (1929bp) protein (643aa)
Heparinase II/III-like protein n=2 Tax=Parabacteroides merdae RepID=A7ADJ7_9PORP
Heparinase II/III-like protein {ECO:0000313|EMBL:EDN87139.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Heparinase II/III family protein
L3_069_000M1_scaffold_815_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15603..16814
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZBQ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08640.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative exported hydrolase
L3_069_000M1_scaffold_815_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17075..17974
DNA (900bp) protein (300aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X4N9_9PORP
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:CDD14084.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphodiesterase
L3_069_000M1_scaffold_815_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17967..21998)
DNA (4032bp) protein (1344aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides merdae RepID=A7ADJ3_9PORP
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDN87134.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
histidine kinase
L3_069_000M1_scaffold_815_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22083..23117
DNA (1035bp) protein (345aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=3 Tax=Parabacteroides RepID=A7ADJ2_9PORP
Iron chelate uptake ABC transporter FeCT family permease protein {ECO:0000313|EMBL:CDD14082.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
iron(III) ABC transporter permease
L3_069_000M1_scaffold_815_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23125..24168
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YZJ8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08644.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
iron(III) ABC transporter ATP-binding protein
L3_069_000M1_scaffold_815_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24225..25577
DNA (1353bp) protein (451aa)
MATE efflux family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WXP7_9PORP
MATE efflux family protein {ECO:0000313|EMBL:CDD14080.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
MATE efflux family protein
L3_069_000M1_scaffold_815_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25650..26222
DNA (573bp) protein (191aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7ADI9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87131.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_815_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26332..26715
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WRZ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14078.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
chaperonin
L3_069_000M1_scaffold_815_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26811..27608
DNA (798bp) protein (266aa)
ferredoxin-NADP(+) reductase subunit alpha (EC:1.18.1.2)
Oxidoreductase NAD-binding domain protein n=2 Tax=Parabacteroides merdae RepID=A7ADI7_9PORP
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:EDN87129.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_000M1_scaffold_815_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27627..29096
DNA (1470bp) protein (490aa)
Glutamate synthase (NADPH), homotetrameric n=2 Tax=Parabacteroides merdae RepID=A7ADI6_9PORP
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EDN87128.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
NADPH-dependent glutamate synthase
L3_069_000M1_scaffold_815_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29414..31423)
DNA (2010bp) protein (670aa)
SusD family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WRF6_9PORP
SusD family protein {ECO:0000313|EMBL:CDD13928.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ragB/SusD family protein
L3_069_000M1_scaffold_815_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31442..34636)
DNA (3195bp) protein (1065aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides RepID=A7ADI4_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN87126.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
tonB-dependent Receptor Plug domain-containing protein
L3_069_000M1_scaffold_815_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35659..36114)
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7ADH9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87121.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_000M1_scaffold_815_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36121..37458)
DNA (1338bp) protein (446aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=4 Tax=Parabacteroides RepID=A7ADH8_9PORP
L3_069_000M1_scaffold_815_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37470..37880)
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ADH7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14649.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_000M1_scaffold_815_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37887..38528)
DNA (642bp) protein (214aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=4 Tax=Parabacteroides RepID=A7ADH6_9PORP
L3_069_000M1_scaffold_815_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38645..39337)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XEB0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14651.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
amidophosphoribosyltransferase
L3_069_000M1_scaffold_815_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39312..39803)
DNA (492bp) protein (164aa)
Regulatory protein RecX n=2 Tax=Parabacteroides merdae RepID=A7ADH4_9PORP
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
regulatory protein
L3_069_000M1_scaffold_815_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39800..40648)
DNA (849bp) protein (283aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Release factor glutamine methyltransferase n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B809_9PORP
prmC; protein-(glutamine-N5) methyltransferase
L3_069_000M1_scaffold_815_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41157..43976
DNA (2820bp) protein (940aa)
hsdR_3; type I site-specific deoxyribonuclease, HsdR family (EC:3.1.21.3)
Type I site-specific deoxyribonuclease HsdR family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X687_9PORP
Type I site-specific deoxyribonuclease HsdR family {ECO:0000313|EMBL:CDD14654.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_000M1_scaffold_815_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43987..44685
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z598_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06541.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
T5orf172 domain-containing protein
L3_069_000M1_scaffold_815_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44690..46243
DNA (1554bp) protein (518aa)
Type I restriction-modification system, M subunit n=2 Tax=Parabacteroides RepID=K5Z616_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14656.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
typeI restriction enzyme EcoR124II M protein
Displaying items 1-30 of 31 in total

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