ggKbase home page

L3_069_000M1_scaffold_822

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_822_1

Not on your lists

comp(1..867)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=root RepID=B0NVF3_BACSE
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61780.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
L3_069_000M1_scaffold_822_2
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(875..1399)
DNA (525bp) protein (175aa)
Uncharacterized protein n=4 Tax=root RepID=B0NVF4_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA49010.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_069_000M1_scaffold_822_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1386..2639)
DNA (1254bp) protein (418aa)
Sigma-54 interaction domain protein n=3 Tax=root RepID=B0NVF5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20989.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
transcriptional regulator
L3_069_000M1_scaffold_822_4

Not on your lists

comp(2641..3738)
DNA (1098bp) protein (366aa)
4-hydroxythreonine-4-phosphate dehydrogenase n=3 Tax=root RepID=R6AAU4_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61777.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
4-hydroxythreonine-4-phosphate dehydrogenase
L3_069_000M1_scaffold_822_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3741..4799)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=3 Tax=root RepID=B0NVF7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13309.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_069_000M1_scaffold_822_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4869..5906)
DNA (1038bp) protein (346aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=3 Tax=root RepID=B0NVF8_BACSE
L3_069_000M1_scaffold_822_7

Not on your lists

comp(6057..8195)
DNA (2139bp) protein (713aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZEM0_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61774.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
peptidyl-prolyl cis-trans isomerase
L3_069_000M1_scaffold_822_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8319..9575)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=3 Tax=root RepID=R6AJU0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49004.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_069_000M1_scaffold_822_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9580..10206)
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NVG1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13313.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_069_000M1_scaffold_822_10

Not on your lists

comp(10211..11530)
DNA (1320bp) protein (440aa)
Tetratricopeptide repeat protein n=4 Tax=root RepID=B0NVG2_BACSE
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61771.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
L3_069_000M1_scaffold_822_11
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11578..12840)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NVG3_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA49001.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_069_000M1_scaffold_822_12

Not on your lists

comp(12827..13558)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZEL5_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61769.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
transcriptional acitvator, Baf family
L3_069_000M1_scaffold_822_13
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13727..14944
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AAS6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA48998.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_069_000M1_scaffold_822_14
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14944..16509
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6B6P3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA48997.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L3_069_000M1_scaffold_822_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16639..19935
DNA (3297bp) protein (1099aa)
Protein translocase subunit SecA n=3 Tax=root RepID=B0NVG7_BACSE
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
protein translocase subunit SecA
L3_069_000M1_scaffold_822_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20114..21208
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AAQ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA48993.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_069_000M1_scaffold_822_17
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21276..21722
DNA (447bp) protein (149aa)
Uncharacterized protein n=4 Tax=root RepID=B0NVG9_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA48992.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_069_000M1_scaffold_822_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(21810..24494)
DNA (2685bp) protein (895aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NVH0_BACSE
L3_069_000M1_scaffold_822_19
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24868..25965
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NVH2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13324.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
transmembrane zinc-binding protein
L3_069_000M1_scaffold_822_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25977..26774
DNA (798bp) protein (266aa)
MazG family protein n=3 Tax=Bacteroides RepID=B0NVH3_BACSE
MazG family protein {ECO:0000313|EMBL:EDS13325.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
nucleotide pyrophosphohydrolase
L3_069_000M1_scaffold_822_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26992..27471)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NVH4_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13326.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_069_000M1_scaffold_822_22
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27505..27873)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NVH5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA48986.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_069_000M1_scaffold_822_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27922..28476)
DNA (555bp) protein (185aa)
Sigma-70 region 2 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NVH6_BACSE
Sigma-70 region 2 {ECO:0000313|EMBL:EDS13328.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_069_000M1_scaffold_822_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28595..29179)
DNA (585bp) protein (195aa)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EDS13329.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EDS13329.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
DNA-3-methyladenine glycosylase I n=2 Tax=Bacteroides RepID=B0NVH7_BACSE
DNA-3-methyladenine glycosylase
L3_069_000M1_scaffold_822_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29223..30137)
DNA (915bp) protein (305aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Bacteroides stercoris CC31F RepID=S3YFE3_BACSE
Displaying 25 items

View Taxonomy