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L3_069_000M1_scaffold_2392

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_2392_1
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(112..948)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MV84_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04037.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_069_000M1_scaffold_2392_2
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1898..3298
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JLI3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64750.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_069_000M1_scaffold_2392_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3620..3937
DNA (318bp) protein (106aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Fructose-1,6-bisphosphatase class 3 n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JPG1_9BACT
Fructose-1,6-bisphosphatase
L3_069_000M1_scaffold_2392_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3993..5411
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MV88_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04040.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_069_000M1_scaffold_2392_5
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5750..7738
DNA (1989bp) protein (663aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Fructose-1,6-bisphosphatase class 3 n=3 Tax=root RepID=B0MV90_9BACT
fructose-1,6-bisphosphatase
L3_069_000M1_scaffold_2392_6

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comp(7924..8595)
DNA (672bp) protein (224aa)
Uncharacterized protein n=3 Tax=root RepID=B0MVI5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC81746.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_069_000M1_scaffold_2392_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8990..9160)
DNA (171bp) protein (57aa)
4Fe-4S binding domain protein n=2 Tax=Alistipes RepID=B0MVI6_9BACT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDE64741.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
4Fe-4S binding protein
L3_069_000M1_scaffold_2392_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9208..10479)
DNA (1272bp) protein (424aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=3 Tax=root RepID=B0MVI7_9BACT
Serine--tRNA ligase {ECO:0000313|EMBL:CDE64738.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_069_000M1_scaffold_2392_9
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10654..12468
DNA (1815bp) protein (605aa)
Collagenase and related proteases (EC:3.4.-.-)
Peptidase U32 family n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JLG7_9BACT
Peptidase U32 family {ECO:0000313|EMBL:CDE64735.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_069_000M1_scaffold_2392_10
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12679..13563
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVI9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04048.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Predicted SAM-dependent methyltransferases
L3_069_000M1_scaffold_2392_11

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13619..13912
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=root RepID=B0MVG4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC74692.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_069_000M1_scaffold_2392_12
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13919..14479)
DNA (561bp) protein (187aa)
Chromate transport protein n=3 Tax=root RepID=B0MVG5_9BACT
Chromate transport protein {ECO:0000313|EMBL:EDS04050.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Chromate transport protein ChrA
L3_069_000M1_scaffold_2392_13
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14476..15018)
DNA (543bp) protein (181aa)
Chromate transport protein n=3 Tax=root RepID=B0MVG6_9BACT
Chromate transport protein {ECO:0000313|EMBL:CDE64724.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
chromate transport protein ChrA
L3_069_000M1_scaffold_2392_14
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15015..15776)
DNA (762bp) protein (254aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JPA8_9BACT
RsmE family RNA methyltransferase
L3_069_000M1_scaffold_2392_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15827..18004
DNA (2178bp) protein (726aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Peptidase family M3 n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JLD6_9BACT
Peptidase family M3 {ECO:0000313|EMBL:CDE64720.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_069_000M1_scaffold_2392_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18013..20130
DNA (2118bp) protein (706aa)
Peptidase family M3 {ECO:0000313|EMBL:EDS04054.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDS04054.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Peptidase family M3 n=2 Tax=root RepID=B0MVG9_9BACT
Zn-dependent oligopeptidase
L3_069_000M1_scaffold_2392_17
unknown

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20633..21220
DNA (588bp) protein (196aa)

This feature has no annotations

Displaying 17 items

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