ggKbase home page

L3_069_000M1_scaffold_359_34

Organism: L3_069_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 17
Location: comp(43474..44367)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 297.0
  • Bit_score: 511
  • Evalue 7.10e-142
tRNA pseudouridine 55 synthase (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 293.0
  • Bit_score: 394
  • Evalue 1.50e-107
tRNA pseudouridine synthase B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 297.0
  • Bit_score: 511
  • Evalue 5.00e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 894
ATGCAAACGCCAAACGGCATTCTGCCCGTCGATAAGCCCGCAGGCTGGACCAGCTTTGATGTGCTGGCCAAGCTGCGCGGCGCACTGGGCACACGCAAGCTGGGACACTCGGGCACACTGGACCCTATGGCCACCGGTGTGCTCGCGGTGTTTATCGGCAAGGCGACCTCCGCCGCTGACCGCCAGCTTGACCACGATAAAACCTACGAAGCTACGCTGCGTCTGGGCCTGCGCACCGACACCGGCGACGTGACCGGCACGACGCTGGAAACTGCCCCCGTCACGGTGGGGGAGGCCGAGCTGCGCGCCGTACTGCCGCAGTTCCGCGGAGACCGCATGCAGCTGCCGCCGATGTACAGCGCGGTGAAAATCAACGGCCAACCGCTGTATAAAGCGGCCCGCAAAGGCCAGACTGTTGAGCGCACGCCCCGCCCCATCACGATCTATGACATCGAATACCTCGGCAGCCCCGCGCCCGACGAATACACCGTCCGCGTCGCCTGCTCCAAGGGCACCTACATCCGCGTACTGGCCGAGGAGATCGGCGACGCCCTCGGCGTGCCCGCCACGCTGTCCGCCCTGCGCCGCACGCAGGCCGGTGTGTTCAGTCTGGCCCAGTGCCACACGCTGCAGGAAATTTTAGCCGCCGCCGAGAGCGGGGAACTCGAAACCAACGGCTGGGTACTGCCGATCGAGTCAGTCTTTACGCCGCTGCCCGCCCTGCACGTCAACAGCGGCGTCAAGGCGCACCTGCTCAACGGCTGCCCGACGAGCCATTACGCTGCCGCCGATGGCCGCTACCGCACCTACGATGAGACCGGCGCGTTTCTGGGTCTGGCCAGCGTCGAGGGCGGCATGCTCAAGGTCGAAAAACTATTTTGCGAAAGGGGCTGA
PROTEIN sequence
Length: 298
MQTPNGILPVDKPAGWTSFDVLAKLRGALGTRKLGHSGTLDPMATGVLAVFIGKATSAADRQLDHDKTYEATLRLGLRTDTGDVTGTTLETAPVTVGEAELRAVLPQFRGDRMQLPPMYSAVKINGQPLYKAARKGQTVERTPRPITIYDIEYLGSPAPDEYTVRVACSKGTYIRVLAEEIGDALGVPATLSALRRTQAGVFSLAQCHTLQEILAAAESGELETNGWVLPIESVFTPLPALHVNSGVKAHLLNGCPTSHYAAADGRYRTYDETGAFLGLASVEGGMLKVEKLFCERG*