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L3_069_000M1_scaffold_1175

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1175_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2..121)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQI4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36616.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_069_000M1_scaffold_1175_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(628..882)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8A8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40124.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_069_000M1_scaffold_1175_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(898..1521)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8A9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40125.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_069_000M1_scaffold_1175_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1508..1828)
DNA (321bp) protein (107aa)
Transcriptional regulator PadR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZN74_9ACTN
Transcriptional regulator PadR family {ECO:0000313|EMBL:CDA35816.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
PadR-like family transcriptional regulator
L3_069_000M1_scaffold_1175_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2013..2246
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40127.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_069_000M1_scaffold_1175_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2486..3490
DNA (1005bp) protein (335aa)
Transcriptional regulator, LuxR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75498.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_069_000M1_scaffold_1175_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3647..8020
DNA (4374bp) protein (1458aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B3_9ACTN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EBA40129.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_069_000M1_scaffold_1175_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8126..9142)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40130.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_069_000M1_scaffold_1175_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9606..11603
DNA (1998bp) protein (666aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase, B subunit, C-terminal domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B6_9ACTN
DNA gyrase, B subunit, C-terminal domain protein {ECO:0000313|EMBL:EBA40132.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_069_000M1_scaffold_1175_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


11648..13888
DNA (2241bp) protein (747aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase/topoisomerase IV A subunit n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZII7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75493.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_069_000M1_scaffold_1175_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14137..15231
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75492.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Archaeal ATPase.
L3_069_000M1_scaffold_1175_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15339..15869)
DNA (531bp) protein (177aa)
Flavin reductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8C0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75491.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_069_000M1_scaffold_1175_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16191..17111
DNA (921bp) protein (307aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8C1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75490.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_069_000M1_scaffold_1175_14
unknown

Not on your lists

comp(17347..17469)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_069_000M1_scaffold_1175_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17718..18068)
DNA (351bp) protein (117aa)
Transcriptional regulator, HxlR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8C2_9ACTN
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EBA40139.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transcriptional regulator, MarR family
L3_069_000M1_scaffold_1175_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18196..18549
DNA (354bp) protein (118aa)
Cupin domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8C4_9ACTN
Cupin domain protein {ECO:0000313|EMBL:EBA40140.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Cupin domain.
L3_069_000M1_scaffold_1175_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18796..19272)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8C8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40144.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Flavodoxins
L3_069_000M1_scaffold_1175_18
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19287..20156)
DNA (870bp) protein (290aa)
Oxidoreductase aldo/keto reductase family protein n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZD34_9CLOT
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CDA36780.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
aldo/keto reductase, diketogulonate reductase
L3_069_000M1_scaffold_1175_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20161..20523)
DNA (363bp) protein (121aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8D0_9ACTN
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:EBA40146.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
L3_069_000M1_scaffold_1175_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20501..20932)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8D1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40147.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_069_000M1_scaffold_1175_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20955..21410)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8D2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40148.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
5-amino-6-(5-phosphoribosylamino)uracil reductase
L3_069_000M1_scaffold_1175_22
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21483..21677)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:568 RepID=R6A6K8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA36777.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
hypothetical protein
L3_069_000M1_scaffold_1175_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21811..22278
DNA (468bp) protein (156aa)
Transcriptional regulator, MerR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8D3_9ACTN
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EBA40149.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Predicted transcriptional regulators
L3_069_000M1_scaffold_1175_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22714..22848)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8D4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40150.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Transcriptional regulator
L3_069_000M1_scaffold_1175_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23011..23223
DNA (213bp) protein (71aa)
Lantibiotic protection ABC transporter, ATP-binding subunit n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFK7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KGI75512.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
multidrug ABC transporter ATPase
Displaying 25 items

View Taxonomy