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L3_069_000M1_scaffold_1408

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1408_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(60..2072)
DNA (2013bp) protein (671aa)
NAD+ synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z894_9ACTN
NAD+ synthase {ECO:0000313|EMBL:CDA35080.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
NAD+ synthetase
L3_069_000M1_scaffold_1408_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2276..3238
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLF9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35081.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_069_000M1_scaffold_1408_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3378..4679
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7N5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40744.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_069_000M1_scaffold_1408_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4894..6573)
DNA (1680bp) protein (560aa)
ATP-binding cassette protein ChvD family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFY5_9ACTN
ATP-binding cassette protein ChvD family {ECO:0000313|EMBL:CDA35464.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter ATP-binding protein
L3_069_000M1_scaffold_1408_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6751..7455)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6Z1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35463.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
putative membrane protein
L3_069_000M1_scaffold_1408_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7448..7726)
DNA (279bp) protein (93aa)
Transcriptional regulator, ArsR family n=2 Tax=Collinsella RepID=A4E7N9_9ACTN
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CDA35462.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcription regulator ArsR
L3_069_000M1_scaffold_1408_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8026..8820
DNA (795bp) protein (265aa)
ThiF family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7P0_9ACTN
ThiF family protein {ECO:0000313|EMBL:EBA40749.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
UBA/THIF-type NAD/FAD binding protein
L3_069_000M1_scaffold_1408_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8877..9617
DNA (741bp) protein (247aa)
Hydrolase TatD family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9E7_9ACTN
Hydrolase TatD family {ECO:0000313|EMBL:CDA35460.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
TatD-related deoxyribonuclease
L3_069_000M1_scaffold_1408_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9895..10758)
DNA (864bp) protein (288aa)
Kinase, PfkB family n=2 Tax=Collinsella RepID=A4E7P7_9ACTN
Kinase, PfkB family {ECO:0000313|EMBL:EBA40756.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PfkB domain-containing protein
L3_069_000M1_scaffold_1408_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10773..11741)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6X6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35453.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
sugar isomerase
L3_069_000M1_scaffold_1408_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11804..12655)
DNA (852bp) protein (284aa)
AP endonuclease, family 2 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7P9_9ACTN
AP endonuclease, family 2 {ECO:0000313|EMBL:EBA40758.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
xylose isomerase domain-containing protein TIM barrel
L3_069_000M1_scaffold_1408_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12657..14240)
DNA (1584bp) protein (528aa)
Amidohydrolase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Q0_9ACTN
Amidohydrolase family protein {ECO:0000313|EMBL:EBA40759.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amidohydrolase 3
L3_069_000M1_scaffold_1408_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14250..15713)
DNA (1464bp) protein (488aa)
C4-dicarboxylate anaerobic carrier n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Q1_9ACTN
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:EBA40760.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
C4-dicarboxylate anaerobic carrier
L3_069_000M1_scaffold_1408_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15932..16675)
DNA (744bp) protein (248aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFV9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72475.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GntR family transcriptional regulator
L3_069_000M1_scaffold_1408_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16826..17485)
DNA (660bp) protein (220aa)
HAD hydrolase family IA variant 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6W9_9ACTN
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDA35448.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
HAD-superfamily hydrolase
L3_069_000M1_scaffold_1408_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17549..18391)
DNA (843bp) protein (281aa)
Cof-like hydrolase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2R8_9ACTN
Cof-like hydrolase {ECO:0000313|EMBL:CDA35447.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
HAD phosphatase superfamily protein
L3_069_000M1_scaffold_1408_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18541..19215)
DNA (675bp) protein (225aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMA5_9ACTN
Displaying 17 items

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