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L3_069_000M1_scaffold_629

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_629_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1..141
DNA (141bp) protein (47aa)
Redoxin family protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D4E5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75503.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
redoxin domain-containing protein
L3_069_000M1_scaffold_629_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

396..2084
DNA (1689bp) protein (563aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8A1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75504.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter-like protein
L3_069_000M1_scaffold_629_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2096..3565
DNA (1470bp) protein (490aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8A1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75504.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
antimicrobial peptide ABC transporter ATPase
L3_069_000M1_scaffold_629_4
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3612..4778)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D4D9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD85106.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
hypothetical protein
L3_069_000M1_scaffold_629_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4941..5894
DNA (954bp) protein (318aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
tRNA-dihydrouridine synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB36_9ACTN
tRNA-U20a,U20b-dihydrouridine synthase
L3_069_000M1_scaffold_629_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5959..6204)
DNA (246bp) protein (82aa)
Glutaredoxin n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E890_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75450.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glutaredoxin
L3_069_000M1_scaffold_629_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6256..7083)
DNA (828bp) protein (276aa)
TipAS antibiotic-recognition domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA10_9ACTN
TipAS antibiotic-recognition domain protein {ECO:0000313|EMBL:CDA36503.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Predicted transcriptional regulators
L3_069_000M1_scaffold_629_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7216..7956
DNA (741bp) protein (247aa)
Methyltransferase YaeB family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5Z4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75452.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
conserved hypothetical protein TIGR00104
L3_069_000M1_scaffold_629_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8075..9289
DNA (1215bp) protein (405aa)
PLP-dependent aminotransferase (EC:4.4.1.8)
Aminotransferase class I/II n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQ85_9ACTN
Aminotransferase class I/II {ECO:0000313|EMBL:CDA36501.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_069_000M1_scaffold_629_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9385..9864)
DNA (480bp) protein (160aa)
5-nitroimidazole antibiotic resistance protein NimB n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA02_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75456.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Predicted flavin-nucleotide-binding protein
L3_069_000M1_scaffold_629_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9907..12711)
DNA (2805bp) protein (935aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5Y4_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA36497.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_069_000M1_scaffold_629_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12880..13305
DNA (426bp) protein (142aa)
Ion channel n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E881_9ACTN
Ion channel {ECO:0000313|EMBL:EBA40097.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Ion channel.
L3_069_000M1_scaffold_629_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13342..13875
DNA (534bp) protein (178aa)
TIGR00730 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E880_9ACTN
TIGR00730 family protein {ECO:0000313|EMBL:EBA40096.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
conserved hypothetical protein, DprA/Smf-related, family 2
L3_069_000M1_scaffold_629_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14001..15305
DNA (1305bp) protein (435aa)
Chloride transporter, ClC family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E879_9ACTN
Chloride transporter, ClC family {ECO:0000313|EMBL:EBA40095.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Chloride channel protein EriC
L3_069_000M1_scaffold_629_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15400..16275)
DNA (876bp) protein (292aa)
Putative membrane protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E878_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EBA40094.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_069_000M1_scaffold_629_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16727..17425)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E877_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40093.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_069_000M1_scaffold_629_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17422..18303)
DNA (882bp) protein (294aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E876_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75463.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter ATP-binding component
L3_069_000M1_scaffold_629_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18327..18707)
DNA (381bp) protein (127aa)
Transcriptional regulator GntR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQ47_9ACTN
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA36491.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
putative transcriptional regulator
L3_069_000M1_scaffold_629_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19272..20885
DNA (1614bp) protein (538aa)
Peptide chain release factor 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCA4_9ACTN
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
bacterial peptide chain release factor 3 (bRF-3)
L3_069_000M1_scaffold_629_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21042..21764
DNA (723bp) protein (241aa)
Putative membrane protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIQ5_9ACTN
Putative membrane protein {ECO:0000313|EMBL:CDA36489.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_069_000M1_scaffold_629_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21774..22454
DNA (681bp) protein (227aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9X1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75467.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_069_000M1_scaffold_629_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22505..23230)
DNA (726bp) protein (242aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ung; uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5V0_9ACTN
L3_069_000M1_scaffold_629_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23320..24222)
DNA (903bp) protein (301aa)
Putative membrane protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQ41_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75469.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_069_000M1_scaffold_629_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24381..25247
DNA (867bp) protein (289aa)
LysR substrate binding domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC97_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75470.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Transcriptional regulator
L3_069_000M1_scaffold_629_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25275..26657)
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIQ0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75471.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_069_000M1_scaffold_629_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26836..27648
DNA (813bp) protein (271aa)
rrmA; ribosomal RNA large subunit methyltransferase A (EC:2.1.1.51)
Methyltransferase domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9W2_9ACTN
Methyltransferase domain protein {ECO:0000313|EMBL:CDA36483.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_069_000M1_scaffold_629_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27778..28179)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E864_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40080.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_069_000M1_scaffold_629_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28616..29320
DNA (705bp) protein (235aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Ribosomal RNA small subunit methyltransferase J n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC90_9ACTN
hypothetical protein
L3_069_000M1_scaffold_629_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29369..29665)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIP5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36479.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_069_000M1_scaffold_629_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29743..30231
DNA (489bp) protein (163aa)
Acetyltransferase, GNAT family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E860_9ACTN
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EBA40076.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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