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L3_069_000M1_scaffold_1653

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1653_1
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(30..1670)
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:357 RepID=R7CSY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD81364.1}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
fibronectin-binding A
L3_069_000M1_scaffold_1653_2
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1974..2810
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
dapF; putative diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Dialister sp. CAG:357 RepID=R7CTL5_9FIRM
L3_069_000M1_scaffold_1653_3
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2850..3743
DNA (894bp) protein (298aa)
TIGR00255 family protein n=1 Tax=Dialister sp. CAG:357 RepID=R7CU02_9FIRM
TIGR00255 family protein {ECO:0000313|EMBL:CDD81366.1}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
hypothetical protein
L3_069_000M1_scaffold_1653_4
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3755..4030
DNA (276bp) protein (92aa)
UPF0296 protein BN625_00759 n=1 Tax=Dialister sp. CAG:357 RepID=R7CUW2_9FIRM
UPF0296 protein BN625_00759 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
hypothetical protein
L3_069_000M1_scaffold_1653_5
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4030..4680
DNA (651bp) protein (217aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
Guanylate kinase n=1 Tax=Dialister sp. CAG:357 RepID=R7CVD2_9FIRM
guanylate kinase
L3_069_000M1_scaffold_1653_6
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4677..4877
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Dialister sp. CAG:357 RepID=R7CSY6_9FIRM
DNA-directed RNA polymerase subunit omega
L3_069_000M1_scaffold_1653_7
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4931..6127
DNA (1197bp) protein (399aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Dialister sp. CAG:357 RepID=R7CTL9_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:CDD81370.1}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
L3_069_000M1_scaffold_1653_8
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6429..7613
DNA (1185bp) protein (395aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Dialister sp. CAG:357 RepID=R7CU08_9FIRM
L3_069_000M1_scaffold_1653_9
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7709..10081
DNA (2373bp) protein (791aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
Primosomal protein N n=1 Tax=Dialister sp. CAG:357 RepID=R7CUW5_9FIRM
primosomal protein N'
L3_069_000M1_scaffold_1653_10
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10135..10602
DNA (468bp) protein (156aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
Peptide deformylase n=1 Tax=Dialister sp. CAG:357 RepID=R7CVD7_9FIRM
peptide deformylase
L3_069_000M1_scaffold_1653_11
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10595..11536
DNA (942bp) protein (314aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
Methionyl-tRNA formyltransferase n=1 Tax=Dialister sp. CAG:357 RepID=R7CSY9_9FIRM
methionyl-tRNA formyltransferase
L3_069_000M1_scaffold_1653_12
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11517..12872
DNA (1356bp) protein (452aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
antitermination factor NusB (EC:2.1.1.176)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Dialister sp. CAG:357 RepID=R7CTM3_9FIRM
L3_069_000M1_scaffold_1653_13
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12874..13905
DNA (1032bp) protein (344aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Dialister sp. CAG:357 RepID=R7CU12_9FIRM
radical SAM enzyme, Cfr family
L3_069_000M1_scaffold_1653_14
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14093..14833
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:357 RepID=R7CUW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD81377.1}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
protein serine/threonine phosphatase
L3_069_000M1_scaffold_1653_15
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14837..16696
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:357 RepID=R7CVE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD81378.1}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
serine/threonine protein kinase with PASTA sensor(s)
L3_069_000M1_scaffold_1653_16
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16703..17362
DNA (660bp) protein (220aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Dialister sp. CAG:357 RepID=R7CSZ3_9FIRM
ribosome biogenesis GTPase RsgA
Displaying 16 items

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