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L3_069_000M1_scaffold_1010

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1010_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

294..563
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C370AA
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06175.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

710..2347
DNA (1638bp) protein (546aa)
recombinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C370AB
Uncharacterized protein {ECO:0000313|EMBL:CCO06176.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein
L3_069_000M1_scaffold_1010_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2598..4793)
DNA (2196bp) protein (732aa)
site-specific DNA recombinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C378F9
recombinase
Recombinase {ECO:0000313|EMBL:CCO06177.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_4
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(5024..5230)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036971C4
Uncharacterized protein {ECO:0000313|EMBL:CDB86984.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_069_000M1_scaffold_1010_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5710..6339)
DNA (630bp) protein (210aa)
Prophage antirepressor n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DFZ3_CLOTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06178.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7234..8343
DNA (1110bp) protein (370aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus albus 8 RepID=E9SAA8_RUMAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06179.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8492..9271
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L4S4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06180.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9285..9926
DNA (642bp) protein (214aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06181.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9929..10894
DNA (966bp) protein (322aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06182.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10934..11626
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MJ73_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06183.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11701..13098
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MMG0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06184.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13088..14986
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HUC6_CYAP4
Uncharacterized protein {ECO:0000313|EMBL:CCO06185.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein
L3_069_000M1_scaffold_1010_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15330..18062
DNA (2733bp) protein (911aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06186.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18102..19274
DNA (1173bp) protein (391aa)
TPR repeat-containing protein n=1 Tax=Acinetobacter baumannii MDR-TJ RepID=I1Y5U0_ACIBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06187.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_15

Not on your lists

19288..19749
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=root RepID=R6ST26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKC61376.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_069_000M1_scaffold_1010_16
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

20048..20719
DNA (672bp) protein (224aa)
Transposase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PUP3_9FIRM
Transposase {ECO:0000313|EMBL:CDC28118.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
transposase
L3_069_000M1_scaffold_1010_17

Not on your lists

20665..20817
DNA (153bp) protein (51aa)
Transposase, Mutator family (Fragment) n=2 Tax=human gut metagenome RepID=K1TQZ2_9ZZZZ
Uncultured bacterium extrachromosomal DNA RGI01625 {ECO:0000313|EMBL:CDL66573.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase
L3_069_000M1_scaffold_1010_18
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20760..20972
DNA (213bp) protein (71aa)
Transposase n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D9C7_9FIRM
Transposase {ECO:0000313|EMBL:CDA74442.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
Transposase and inactivated derivatives
L3_069_000M1_scaffold_1010_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21369..22115)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CDH2_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06190.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22109..23059)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CQB0_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06191.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_21
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23158..23334)
DNA (177bp) protein (59aa)
Stage V sporulation protein T n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D722_9FIRM
Stage V sporulation protein T {ECO:0000313|EMBL:CDA73677.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
AbrB family transcriptional regulator
L3_069_000M1_scaffold_1010_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23680..24702
DNA (1023bp) protein (341aa)
Glycoside Hydrolase Family 5 protein (EC:3.2.1.-)
Glycoside Hydrolase Family 5 protein {ECO:0000313|EMBL:CCO06210.1}; EC=3.2.1.- {ECO:0000313|EMBL:CCO06210.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative carbohydrate-active enzyme n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CKW9_9FIRM
L3_069_000M1_scaffold_1010_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25124..25981
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65750.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_069_000M1_scaffold_1010_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25999..27423
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SX14_9FIRM
extracellular solute-binding protein, family 1
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:CCO06212.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27543..28304
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCZ8_9FIRM
Transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCO06213.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28419..29186
DNA (768bp) protein (256aa)
Glycoside Hydrolase Family 16 protein (EC:3.2.1.-)
Glycoside Hydrolase Family 16 protein {ECO:0000313|EMBL:CCO06214.1}; EC=3.2.1.- {ECO:0000313|EMBL:CCO06214.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative carbohydrate-active enzyme n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0J1_9FIRM
L3_069_000M1_scaffold_1010_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29415..30593)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T7N1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06215.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1010_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31229..33997
DNA (2769bp) protein (923aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SX09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65743.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
Displaying 28 items

View Taxonomy