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L3_069_000M1_scaffold_1549

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1549_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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196..537
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1J4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03757.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1549_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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534..1490
DNA (957bp) protein (319aa)
conserved hypothetical protein (EC:1.1.1.29)
Putative glycerate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO03758.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1549_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1471..2307
DNA (837bp) protein (279aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Glutamate 5-kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T537_9FIRM
L3_069_000M1_scaffold_1549_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2313..3566
DNA (1254bp) protein (418aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
proA; Gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THJ0_9FIRM
L3_069_000M1_scaffold_1549_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3687..4301
DNA (615bp) protein (205aa)
Radical SAM domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U952_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDC67337.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_069_000M1_scaffold_1549_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4444..6195
DNA (1752bp) protein (584aa)
Sigma-70 region 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1K0_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CDC67338.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
sig1; RNA polymerase sigma factor
L3_069_000M1_scaffold_1549_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6432..8555
DNA (2124bp) protein (708aa)
Sigma-70 region 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCB0_9FIRM
sig2; RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO03763.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1549_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8646..9707
DNA (1062bp) protein (354aa)
hisC; Histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CCO03764.1}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CCO03764.1};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Histidinol-phosphate aminotransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T540_9FIRM
L3_069_000M1_scaffold_1549_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9932..10903
DNA (972bp) protein (324aa)
cobD; Adenosylcobinamide-phosphate synthase CobD (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THJ5_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1549_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11040..12674)
DNA (1635bp) protein (545aa)
Endoglucanase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U957_9FIRM
Endoglucanase {ECO:0000313|EMBL:CDC67342.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Glycoside Hydrolase Family 5 protein
L3_069_000M1_scaffold_1549_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13391..14131
DNA (741bp) protein (247aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1K5_9FIRM
ABC transporter ATPase component
ABC transporter ATPase component {ECO:0000313|EMBL:CCO03767.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1549_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14118..15440
DNA (1323bp) protein (441aa)
ABC-2 type transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCB5_9FIRM
ABC transporter membrane component
ABC transporter membrane component {ECO:0000313|EMBL:CCO03768.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1549_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15593..16363)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T544_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67345.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_1549_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16445..17662)
DNA (1218bp) protein (406aa)
Aspartate aminotransferase (EC:2.6.1.1)
Aminotransferase class I/II n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THK0_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CDC67346.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_1549_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17664..18032)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U964_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67347.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
Displaying 15 items

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