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L3_069_000M1_scaffold_1590

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1590_1
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(175..1176)
DNA (1002bp) protein (334aa)
UPI0002EB4808 related cluster n=1 Tax=unknown RepID=UPI0002EB4808
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV68179.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_069_000M1_scaffold_1590_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1324..2862)
DNA (1539bp) protein (513aa)
Ferredoxin hydrogenase, large subunit {ECO:0000313|EMBL:CCO06153.1}; EC=1.12.7.2 {ECO:0000313|EMBL:CCO06153.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6A0_9FIRM
L3_069_000M1_scaffold_1590_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3281..3745
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDG2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06154.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3742..4986
DNA (1245bp) protein (415aa)
Phage terminase large subunit PBSX family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2Q4_9FIRM
phage terminase large subunit
Phage terminase large subunit {ECO:0000313|EMBL:CCO06155.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5020..6186
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAA4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06156.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6183..7019
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIN5_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06157.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7197..8171
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T694_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06158.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8184..8612
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDF7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDC67724.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_1590_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8628..9050
DNA (423bp) protein (141aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2P6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06160.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9043..9387
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAA1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06161.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9387..10295
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67721.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_1590_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10369..11250)
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T688_9FIRM
sugar transport system permease protein
Sugar transport system permease protein {ECO:0000313|EMBL:CCO06163.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11257..12186)
DNA (930bp) protein (310aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDF2_9FIRM
sugar transport system permease protein
Sugar transport system permease protein {ECO:0000313|EMBL:CCO06164.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12280..13794)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67718.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ABC transporter extracellular-binding protein
L3_069_000M1_scaffold_1590_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13873..14883)
DNA (1011bp) protein (337aa)
Transcriptional regulator LacI family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UA98_9FIRM
Transcriptional regulator, LacI family
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDC67717.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_1590_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16044..16979)
DNA (936bp) protein (312aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0MS72_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06168.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16976..17572)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z811_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06169.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1590_18
unknown

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comp(17656..17850)
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 18 items

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