ggKbase home page

L3_069_000M1_scaffold_1678

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1678_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(351..800)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCM6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05127.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1678_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(810..1346)
DNA (537bp) protein (179aa)
Helix-turn-helix domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5E5_9FIRM
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDC67455.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_069_000M1_scaffold_1678_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1561..2229
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67456.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_069_000M1_scaffold_1678_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2326..3786
DNA (1461bp) protein (487aa)
Band 7 protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9I7_9FIRM
Band 7 protein {ECO:0000313|EMBL:CDC67457.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_069_000M1_scaffold_1678_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3876..4391)
DNA (516bp) protein (172aa)
nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1Z8_9FIRM
L3_069_000M1_scaffold_1678_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4394..6652)
DNA (2259bp) protein (753aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CCO05132.1}; EC=1.17.4.2 {ECO:0000313|EMBL:CCO05132.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCN0_9FIRM
L3_069_000M1_scaffold_1678_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7067..7264)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5F1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05133.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1678_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7548..9383
DNA (1836bp) protein (612aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:CCO05134.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CCO05134.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
asnH; Asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THX9_9FIRM
L3_069_000M1_scaffold_1678_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9638..10081
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9J3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC67462.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_1678_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10116..11090
DNA (975bp) protein (325aa)
Band 7 protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T203_9FIRM
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:CDC67463.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_1678_11
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11655..12257)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CP29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA73246.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_1678_12
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12288..12656)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6C7C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA71410.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_069_000M1_scaffold_1678_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12671..13153)
DNA (483bp) protein (161aa)
Cell wall binding repeat-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZK6_9CLOT
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05138.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1678_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13269..13709)
DNA (441bp) protein (147aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05139.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1678_15
Enterococcus mundtii, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13966..14295)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Enterococcus mundtii RepID=UPI00035EAF24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO07120.1}; TaxID=1300150 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus mundtii QU 25.;"
L3_069_000M1_scaffold_1678_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14301..14618)
DNA (318bp) protein (106aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Acetonema longum DSM 6540 RepID=F7NNK0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05140.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1678_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14733..15017)
DNA (285bp) protein (95aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05140.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1678_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15189..15863)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U1W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC64852.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_1678_19
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15938..16327)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CRV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA74251.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_069_000M1_scaffold_1678_20
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16327..16650)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D8R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA74252.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_069_000M1_scaffold_1678_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16747..17184)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3K410_TRESO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04203.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying 21 items

View Taxonomy