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L3_069_000M1_scaffold_1682

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1682_1
unknown

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2..706
DNA (705bp) protein (235aa)

This feature has no annotations

L3_069_000M1_scaffold_1682_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1233..3491)
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67775.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_1682_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3506..4963)
DNA (1458bp) protein (486aa)
Putative alginate O-acetyltransferase AlgI n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIU4_9FIRM
Putative alginate O-acetyltransferase
Putative alginate O-acetyltransferase {ECO:0000313|EMBL:CCO04020.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1682_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5179..5952)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAF1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC67777.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_1682_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6182..7912)
DNA (1731bp) protein (577aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CCO04018.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
phoR; Two-component system sensor histidine kinase PhoR (EC:2.7.13.3)
PAS domain S-box protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDK9_9FIRM
L3_069_000M1_scaffold_1682_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7940..8617)
DNA (678bp) protein (226aa)
Two component transcriptional regulator winged helix family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6E5_9FIRM
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDC67780.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
phoB; Two-component system transcriptional regulator PhoB
L3_069_000M1_scaffold_1682_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8636..10417)
DNA (1782bp) protein (594aa)
Na/Pi-cotransporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIU9_9FIRM
Na/Pi-cotransporter {ECO:0000313|EMBL:CDC67781.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Putative Sodium/phosphate symporter
L3_069_000M1_scaffold_1682_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10577..11236)
DNA (660bp) protein (220aa)
Phosphate transport system regulatory protein PhoU n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAF7_9FIRM
phoU; Phosphate transport system regulator protein PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1682_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11273..12028)
DNA (756bp) protein (252aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
pstB; Phosphate ABC transporter, ATP-binding protein (EC:3.6.3.27)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2V9_9FIRM
L3_069_000M1_scaffold_1682_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12032..12877)
DNA (846bp) protein (282aa)
Phosphate ABC transporter membrane protein 2 PhoT family (TC 3.A.1.7.1) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDL4_9FIRM
Phosphate ABC transporter membrane protein 2 PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CDC67784.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
pstA; Phosphate ABC transporter permease component PstA
L3_069_000M1_scaffold_1682_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12883..13803)
DNA (921bp) protein (307aa)
Phosphate ABC transporter permease protein PstC n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6E9_9FIRM
pstC; Phosphate ABC transporter permease component PstC
Phosphate ABC transporter permease component PstC {ECO:0000313|EMBL:CCO04012.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1682_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14080..15033)
DNA (954bp) protein (318aa)
Putative Phosphate-binding protein PstS 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIV4_9FIRM
Putative Phosphate-binding protein PstS 2 {ECO:0000313|EMBL:CDC67786.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
pstS2; Phosphate-binding protein pstS 2
L3_069_000M1_scaffold_1682_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15115..15276
DNA (162bp) protein (54aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04010.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1682_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15250..16221)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAG3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04009.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_1682_15
unknown

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16369..16635
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying 15 items

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