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L3_069_000M1_scaffold_91

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_91_1
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

293..1255
DNA (963bp) protein (321aa)
Agmatinase n=1 Tax=Clostridium sp. CAG:167 RepID=R5VUH0_9CLOT
Agmatinase {ECO:0000313|EMBL:CCZ91449.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
agmatinase
L3_069_000M1_scaffold_91_2
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1248..2210
DNA (963bp) protein (321aa)
Agmatinase n=1 Tax=Clostridium sp. CAG:167 RepID=R5W6S2_9CLOT
Agmatinase {ECO:0000313|EMBL:CCZ91451.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
agmatinase
L3_069_000M1_scaffold_91_3
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2232..3146
DNA (915bp) protein (305aa)
putative agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Clostridium sp. CAG:167 RepID=R5VUH0_9CLOT
Agmatinase {ECO:0000313|EMBL:CCZ91449.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
L3_069_000M1_scaffold_91_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3179..4576
DNA (1398bp) protein (466aa)
MATE efflux family protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z8B6_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CCQ94251.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
MATE efflux family protein
L3_069_000M1_scaffold_91_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4956..5900
DNA (945bp) protein (315aa)
oppB; Oligopeptide ABC transporter membrane component (EC:3.6.3.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67041.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_91_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5914..6816
DNA (903bp) protein (301aa)
oppC; Oligopeptide ABC transporter membrane component (EC:3.6.3.23)
Oligopeptide ABC transporter membrane component {ECO:0000313|EMBL:CCO05584.1}; EC=3.6.3.23 {ECO:0000313|EMBL:CCO05584.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4E1_9FIRM
L3_069_000M1_scaffold_91_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6836..7837
DNA (1002bp) protein (334aa)
oppD; Oligopeptide ABC transporter, ATPase component (EC:3.6.3.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67039.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_91_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7830..8825
DNA (996bp) protein (332aa)
oppF; Oligopeptide ABC transporter, ATPase component (EC:3.6.3.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67038.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_91_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8858..10480
DNA (1623bp) protein (541aa)
oppA; Oligopeptide-binding protein OppA (EC:3.6.3.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67037.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_91_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10535..12220
DNA (1686bp) protein (562aa)
Ammonium transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGR5_9FIRM
amt1; Ammonium transporter
Ammonium transporter {ECO:0000313|EMBL:CCO05580.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_91_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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12250..13086
DNA (837bp) protein (279aa)
Transcriptional regulator, MerR family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR69_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EHM49951.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
transcriptional regulator
L3_069_000M1_scaffold_91_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13156..13335)
DNA (180bp) protein (60aa)
Transposase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T263_9FIRM
Transposase {ECO:0000313|EMBL:CDC66295.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_91_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13440..16169)
DNA (2730bp) protein (910aa)
Mannan endo-1 4-beta-mannosidase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAH0_9FIRM
Carbohydrate-Binding Module Family 35 protein / Glycoside Hydrolase Family 26 protein
Carbohydrate-Binding Module Family 35 protein / Glycoside Hydrolase Family 26 protein {ECO:0000313|EMBL:CCO04218.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_91_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16308..17321)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66678.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_069_000M1_scaffold_91_15
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17557..23931
DNA (6375bp) protein (2125aa)
Fervidolysin. Serine peptidase. MEROPS family S08A n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LME2_SYNFM
peptidase S8/S53 subtilisin kexin sedolisin
Fervidolysin. Serine peptidase. MEROPS family S08A {ECO:0000313|EMBL:ABK18594.1}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
L3_069_000M1_scaffold_91_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24581..26743
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U793_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO04220.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
conserved hypothetical protein
L3_069_000M1_scaffold_91_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26831..28792
DNA (1962bp) protein (654aa)
Endoglucanase {ECO:0000256|RuleBase:RU361153}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361153};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Cellulase (Glycosyl hydrolase family 5) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFL4_9FIRM
Carbohydrate-Binding Module Family 2 protein / Glycoside Hydrolase Family 5 protein
L3_069_000M1_scaffold_91_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28853..29722)
DNA (870bp) protein (290aa)
EDD domain protein DegV family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T3A3_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04222.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_91_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29821..32175)
DNA (2355bp) protein (785aa)
Putative negative regulator of genetic competence ClpC/MecB n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAG5_9FIRM
Putative ATP-dependent Clp protease ATP-binding subunit
Putative ATP-dependent Clp protease ATP-binding subunit {ECO:0000313|EMBL:CCO04223.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_91_20
unknown

Not on your lists

comp(32402..32593)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_069_000M1_scaffold_91_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32612..34123)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U790_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66672.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_069_000M1_scaffold_91_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34321..35355
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFL0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04226.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_91_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35457..36449)
DNA (993bp) protein (331aa)
vanY1; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CCO04227.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CCO04227.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus albus 8 RepID=E9SD68_RUMAL
L3_069_000M1_scaffold_91_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36543..36998)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAF9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04228.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_91_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37027..37548)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZQ1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04228.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_91_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37532..38293)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U785_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04229.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_91_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38354..38773
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFK7_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04230.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_91_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38932..40971)
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T396_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66665.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_91_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41175..41549)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAF4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04232.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_91_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41563..42249)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZP6_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCO04233.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 1-30 of 101 in total

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