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L3_069_000M1_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_200_1
unknown

Not on your lists

comp(43..201)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_069_000M1_scaffold_200_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(315..1559)
DNA (1245bp) protein (415aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCP5_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCO05141.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_200_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1797..2048)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T082_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC65630.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_200_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2110..4008)
DNA (1899bp) protein (633aa)
Polysaccharide biosynthesis protein n=1 Tax=Ruminococcus albus 8 RepID=E9SAY0_RUMAL
epsM; protein involved in exopolysaccharide synthesis
Protein involved in exopolysaccharide synthesis {ECO:0000313|EMBL:CCO05143.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_200_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4202..4324
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U497_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05144.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_200_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4464..5030
DNA (567bp) protein (189aa)
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T076_9FIRM
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDC65625.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
sig14; RNA polymerase sigma factor
L3_069_000M1_scaffold_200_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4981..6333
DNA (1353bp) protein (451aa)
Serine/threonine protein kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T7B8_9FIRM
Serine/threonine protein kinase {ECO:0000313|EMBL:CDC65624.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_069_000M1_scaffold_200_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6372..7052)
DNA (681bp) protein (227aa)
sleB; Spore cortex-lytic enzyme (probable N-acetylmuramyl-L-alanine amidase) (EC:3.5.1.28)
Spore cortex-lytic enzyme (Probable N-acetylmuramyl-L-alanine amidase) {ECO:0000313|EMBL:CCO05148.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CCO05148.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative spore cortex-lytic enzyme n=1 Tax=Ruminococcus albus 8 RepID=E9S795_RUMAL
L3_069_000M1_scaffold_200_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8085..8603
DNA (519bp) protein (173aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SWC5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05149.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_200_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8600..9196
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3S9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05150.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_200_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9211..9729
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65456.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_200_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9845..10693
DNA (849bp) protein (283aa)
Patatin n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZQ5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05152.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_200_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10709..11566
DNA (858bp) protein (286aa)
Metallophosphoesterase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6S6_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:CDC65454.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_069_000M1_scaffold_200_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11569..12858
DNA (1290bp) protein (430aa)
putative dipeptidase (EC:3.4.13.-)
Dipeptidase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SWA2_9FIRM
Dipeptidase {ECO:0000313|EMBL:CDC65453.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_200_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12955..13791
DNA (837bp) protein (279aa)
tyrA; Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:CCO05155.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CCO05155.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Prephenate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3S1_9FIRM
L3_069_000M1_scaffold_200_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13842..15041)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC78_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDC65451.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_200_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15121..15597)
DNA (477bp) protein (159aa)
ppiD; Peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493, ECO:0000313|EMBL:CCO05157.1}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493, ECO:0000313|EMBL:CCO05157.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZP9_9FIRM
L3_069_000M1_scaffold_200_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15633..16142)
DNA (510bp) protein (170aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6S1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05158.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_200_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16202..16906)
DNA (705bp) protein (235aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SW95_9FIRM
hypothetical protein predicted by Glimmer/Critica
Conserved domain protein {ECO:0000313|EMBL:CDC65448.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_200_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17306..19177
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65447.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_200_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19301..20860
DNA (1560bp) protein (520aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
glpK; Glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC74_9FIRM
L3_069_000M1_scaffold_200_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20903..22186)
DNA (1284bp) protein (428aa)
folC; FolC probable bifunctional protein (folylpolyglutamate synthetase/dihydrofolate synthetase) (EC:6.3.2.17)
FolC probable bifunctional protein (Folylpolyglutamate synthetase/dihydrofolate synthetase) {ECO:0000313|EMBL:CCO05162.1}; EC=6.3.2.17 {ECO:0000313|EMBL:CCO05162.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
FolC bifunctional protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZP3_9FIRM
L3_069_000M1_scaffold_200_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22195..24036)
DNA (1842bp) protein (614aa)
UvrABC system protein C n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6R7_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
uvrC; UvrABC system protein C
L3_069_000M1_scaffold_200_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24104..25900)
DNA (1797bp) protein (599aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SW89_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05164.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_200_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26214..27284
DNA (1071bp) protein (357aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3Q7_9FIRM
L3_069_000M1_scaffold_200_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27350..28060
DNA (711bp) protein (237aa)
NAD-dependent deacetylase (EC:3.5.1.-)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968, ECO:0000313|EMBL:CCO05166.1};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
NAD-dependent protein deacetylase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC70_9FIRM
L3_069_000M1_scaffold_200_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28145..29920)
DNA (1776bp) protein (592aa)
ABC transporter permease/ATP-binding protein (EC:3.6.3.-)
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CCO05167.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05167.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZN7_9FIRM
L3_069_000M1_scaffold_200_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29921..31684)
DNA (1764bp) protein (588aa)
ABC transporter permease/ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6R2_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC65439.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_200_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32067..32774)
DNA (708bp) protein (236aa)
Fructose-2 6-bisphosphatase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SW83_9FIRM
Fructose-2 6-bisphosphatase {ECO:0000313|EMBL:CDC65438.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_069_000M1_scaffold_200_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32790..34148)
DNA (1359bp) protein (453aa)
Multi antimicrobial extrusion protein MatE2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3P8_9FIRM
Multi antimicrobial extrusion protein MatE2 {ECO:0000313|EMBL:CDC65437.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
multidrug resistance protein, MATE family, drug/sodium antiporter
Displaying items 1-30 of 69 in total

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