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L3_069_000M1_scaffold_422

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_422_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2001..3092
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5A9I6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04342.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_422_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3367..3630)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B5208F
Dihydrolipoamide succinyltransferase {ECO:0000313|EMBL:EXM40833.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
L3_069_000M1_scaffold_422_3
unknown

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comp(3582..3776)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_069_000M1_scaffold_422_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3788..4459)
DNA (672bp) protein (224aa)
Pretoxin HINT domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H171_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04341.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_422_5
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4628..5029)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B5208F
Dihydrolipoamide succinyltransferase {ECO:0000313|EMBL:EXM40833.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
L3_069_000M1_scaffold_422_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5043..5888)
DNA (846bp) protein (282aa)
Pretoxin HINT domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H171_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04341.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_422_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5912..6511)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGJ3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06203.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_069_000M1_scaffold_422_8
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6606..6935)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5J1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK33213.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
L3_069_000M1_scaffold_422_9
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6948..7340)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Selenomonas noxia F0398 RepID=G5H493_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS16091.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
hypothetical protein
L3_069_000M1_scaffold_422_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7735..8220)
DNA (486bp) protein (162aa)
Glycopeptide antibiotics resistance protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZU8_9FIRM
Glycopeptide antibiotics resistance protein {ECO:0000313|EMBL:CDC66728.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_069_000M1_scaffold_422_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8171..10009)
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000313|EMBL:CCO04338.1};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
glmS; L-glutamine:D-fructose-6-phosphate isomerase (deaminating) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LD95_9FIRM
L3_069_000M1_scaffold_422_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10023..10481)
DNA (459bp) protein (153aa)
putative (di)nucleoside polyphosphate hydrolase (EC:3.6.1.-)
Putative (Di)nucleoside polyphosphate hydrolase {ECO:0000313|EMBL:CCO04337.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCO04337.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6B2E7_9CLOT
L3_069_000M1_scaffold_422_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10481..11674)
DNA (1194bp) protein (398aa)
Nucleoside-diphosphate-sugar epimerases n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAB4_9FIRM
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:CDC67742.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Nucleoside-diphosphate-sugar epimerases
L3_069_000M1_scaffold_422_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11688..12878)
DNA (1191bp) protein (397aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2S2_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDC67743.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_422_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12918..13427)
DNA (510bp) protein (170aa)
Sugar O-acyltransferase sialic acid O-acetyltransferase NeuD family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDH5_9FIRM
Sugar O-acyltransferase sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:CDC67744.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_069_000M1_scaffold_422_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13429..14469)
DNA (1041bp) protein (347aa)
Capsular polysaccharide biosynthesis protein Cps4J n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6B5_9FIRM
Capsular polysaccharide biosynthesis protein Cps4J {ECO:0000313|EMBL:CDC67745.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
capsular polysaccharide biosynthesis protein capD
L3_069_000M1_scaffold_422_17
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14471..15973)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HFJ3_9BACE
Wzx {ECO:0000313|EMBL:AKE80288.1}; TaxID=1307 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis.;"
polysaccharide biosynthesis protein
L3_069_000M1_scaffold_422_18
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15979..16926)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ED53_9CLOT
Hemolytic protein HlpA-like protein {ECO:0000313|EMBL:ETT45154.1}; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-269.;"
methyltransferase FkbM
L3_069_000M1_scaffold_422_19
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16949..17773)
DNA (825bp) protein (275aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K386_9CLOT
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDE69492.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_069_000M1_scaffold_422_20
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17778..19541)
DNA (1764bp) protein (588aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|SAAS:SAAS00056887}; EC=2.2.1.- {ECO:0000256|SAAS:SAAS00275386};; EC=2.2.1.9 {ECO:0000256|SAAS:SAAS00056850};; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase MenD (EC:2.2.1.9)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AHF7_9FIRM
L3_069_000M1_scaffold_422_21
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19541..20683)
DNA (1143bp) protein (381aa)
Polysaccharide pyruvyl transferase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RU21_SPHGB
polysaccharide pyruvyl transferase
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:ADY12107.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L3_069_000M1_scaffold_422_22
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20699..21772)
DNA (1074bp) protein (358aa)
Putative polysaccharide polymerase protein n=1 Tax=Bacillus thuringiensis subsp. finitimus (strain YBT-020) RepID=F0PU56_BACT0
putative polysaccharide polymerase protein
Putative polysaccharide polymerase protein {ECO:0000313|EMBL:ADY24475.1}; TaxID=930170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis subsp. finitimus (strain YBT-020).;"
L3_069_000M1_scaffold_422_23
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21781..22980)
DNA (1200bp) protein (400aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDR45534.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDR45534.1};; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0GAK2_9FIRM
hypothetical protein
L3_069_000M1_scaffold_422_24

Not on your lists

comp(23014..23988)
DNA (975bp) protein (325aa)
Glycosyl transferase family 2 n=1 Tax=uncultured bacterium RepID=K1XFT0_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EKD29075.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glycosyltransferase
L3_069_000M1_scaffold_422_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23990..24403)
DNA (414bp) protein (138aa)
Putative glycerol-3-phosphate cytidylyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF31_9FIRM
Putative glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:EFQ08151.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
glycerol-3-phosphate cytidyltransferase
L3_069_000M1_scaffold_422_26
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24407..25204)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003765709
Uncharacterized protein {ECO:0000313|EMBL:KGN70212.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-239 OH1446.;"
CDP-alcohol phosphatidyltransferase
L3_069_000M1_scaffold_422_27
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25220..25642)
DNA (423bp) protein (141aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2N8D7_9BACE
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EEF91811.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
Serine acetyltransferase-like protein
L3_069_000M1_scaffold_422_28
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25752..27764)
DNA (2013bp) protein (671aa)
Sugar transferase involved in lipopolysaccharide synthesis n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V785_CLOSS
WcaJ; sugar transferase involved in lipopolysaccharide synthesis
Sugar transferase involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:BAK48513.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L3_069_000M1_scaffold_422_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27776..29044)
DNA (1269bp) protein (423aa)
Putative polysaccharide biosynthesis protein YvfE n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6C7_9FIRM
Putative polysaccharide biosynthesis protein YvfE {ECO:0000313|EMBL:CDC67760.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
aminotransferase family protein
L3_069_000M1_scaffold_422_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29454..29636
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67761.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Displaying items 1-30 of 47 in total

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