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L3_069_000M1_scaffold_784

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_784_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..315
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CES7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04798.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_784_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

352..2466
DNA (2115bp) protein (705aa)
Signal peptidase I n=1 Tax=Ruminococcus albus 8 RepID=E9SFT3_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:CCO04799.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_784_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2500..3171
DNA (672bp) protein (224aa)
sipW2; Signal peptidase I (archaeal type) (EC:3.4.21.89)
Signal peptidase I (Archaeal type) {ECO:0000313|EMBL:CCO04800.1}; EC=3.4.21.89 {ECO:0000313|EMBL:CCO04800.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Peptidase S26B signal peptidase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T267_9FIRM
L3_069_000M1_scaffold_784_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3143..3595
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEK5_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04801.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_784_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3614..3841
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U624_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDC66302.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_784_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3856..4806
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYN3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04803.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_784_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4842..14576
DNA (9735bp) protein (3245aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TET4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66376.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_784_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14603..15298
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6B8_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04806.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_784_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15331..16107
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYX6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04807.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_784_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16385..16630)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9I0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04808.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_784_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16643..17815)
DNA (1173bp) protein (391aa)
sfcA; Malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate-decarboxylating) {ECO:0000313|EMBL:CCO04809.1}; EC=1.1.1.38 {ECO:0000313|EMBL:CCO04809.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
NAD-dependent malic enzyme n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2E4_9FIRM
L3_069_000M1_scaffold_784_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17907..18779)
DNA (873bp) protein (291aa)
PHP domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TET9_9FIRM
PHP domain protein {ECO:0000313|EMBL:CDC66381.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_069_000M1_scaffold_784_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18986..19957)
DNA (972bp) protein (324aa)
rluC; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6C5_9FIRM
Pseudouridine synthase {ECO:0000313|EMBL:CDC66382.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_784_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19966..20382)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66383.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_069_000M1_scaffold_784_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20830..22800
DNA (1971bp) protein (657aa)
UvrABC system protein B n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9I5_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
uvrB; UvrABC system protein B
L3_069_000M1_scaffold_784_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22923..25745
DNA (2823bp) protein (941aa)
UvrABC system protein A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2E7_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
uvrA; UvrABC system protein A
L3_069_000M1_scaffold_784_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26177..26743
DNA (567bp) protein (189aa)
Peptidase M50 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEU4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04815.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_784_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26911..28764
DNA (1854bp) protein (618aa)
Radical SAM domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6D2_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDC66387.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_069_000M1_scaffold_784_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28751..29452
DNA (702bp) protein (234aa)
Radical SAM-linked protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYY6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04817.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_784_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29644..29988
DNA (345bp) protein (115aa)
50S ribosomal protein L19 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9I9_9FIRM
rplS; ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_784_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30436..31278
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66390.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
Displaying 21 items

View Taxonomy