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L3_069_000M1_scaffold_867

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_867_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..438)
DNA (438bp) protein (146aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T189_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03877.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

665..2815
DNA (2151bp) protein (717aa)
Tex-like protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UGH0_RUMA7
Tex-like protein
Tex-like protein {ECO:0000313|EMBL:CCO03878.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3036..3761
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67232.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Two-component system transcriptional regulator
L3_069_000M1_scaffold_867_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3761..5086
DNA (1326bp) protein (442aa)
Putative two-component system sensor histidine kinase (EC:2.7.13.3)
Histidine kinase-DNA gyrase B-and HSP90-like ATPase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TH64_9FIRM
Histidine kinase-DNA gyrase B-and HSP90-like ATPase {ECO:0000313|EMBL:CDC67231.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_069_000M1_scaffold_867_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5209..5805
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67230.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Putative agrB-like protein
L3_069_000M1_scaffold_867_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5792..5926
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC21_9FIRM
secreted hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF44008.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_7
unknown

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6408..7304
DNA (897bp) protein (299aa)

This feature has no annotations

L3_069_000M1_scaffold_867_8
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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7386..8795
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RXD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF69300.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L3_069_000M1_scaffold_867_9
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8924..9619
DNA (696bp) protein (232aa)
Response regulator of the LytR/AlgR family n=2 Tax=Ruminococcus RepID=D4LEL2_RUMC1
Two-component system transcriptional regulator
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CDA71607.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_069_000M1_scaffold_867_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9616..10914
DNA (1299bp) protein (433aa)
Two-component system sensor histidine kinase (EC:2.7.13.3)
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CCO03884.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCO03884.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ATP-binding region ATPase domain protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CFC3_9FIRM
L3_069_000M1_scaffold_867_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11033..11623
DNA (591bp) protein (197aa)
Accessory gene regulator B n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6C7X0_9FIRM
Putative agrB-like protein
Putative agrB-like protein {ECO:0000313|EMBL:CCO03885.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_12
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11777..11932
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D1X3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDA71612.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_069_000M1_scaffold_867_13
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11967..15284
DNA (3318bp) protein (1106aa)
Lecithin:cholesterol acyltransferase n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CFC7_9FIRM
Carbohydrate-Binding Module Family 3 protein
Lecithin:cholesterol acyltransferase {ECO:0000313|EMBL:CDA71614.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_069_000M1_scaffold_867_14
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15301..16164
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6C7X3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDA71615.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_069_000M1_scaffold_867_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16402..16995)
DNA (594bp) protein (198aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LEK9_RUMC1
Transposon resolvase
Transposon resolvase {ECO:0000313|EMBL:CCO03889.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17014..18504)
DNA (1491bp) protein (497aa)
Relaxase/Mobilisation nuclease domain n=2 Tax=Ruminococcus RepID=D4LEK8_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03890.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_17
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18501..19172)
DNA (672bp) protein (224aa)
AT hook motif n=2 Tax=Ruminococcus RepID=D4LEK7_RUMC1
unnamed protein product
AT hook motif {ECO:0000313|EMBL:CDA74362.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_069_000M1_scaffold_867_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20120..20518
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R6CCL2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03893.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20657..20854
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CND9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03894.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20948..22612
DNA (1665bp) protein (555aa)
Site-specific recombinases, DNA invertase Pin homologs n=2 Tax=Ruminococcus RepID=D4LEK4_RUMC1
Site-specific DNA recombinase
Site-specific DNA recombinase {ECO:0000313|EMBL:CCO03895.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22546..24231)
DNA (1686bp) protein (562aa)
Putative LPXTG-motif protein cell wall anchor domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6P3K0_9CLOT
Putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:CCO03896.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24291..24677)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PTF0_9CLOT
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03897.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24856..25485)
DNA (630bp) protein (210aa)
Transcriptional regulator LuxR family n=1 Tax=Clostridium sp. CAG:413 RepID=R6NLM1_9CLOT
Two-component system transcriptional regulator
Two-component system transcriptional regulator {ECO:0000313|EMBL:CCO03898.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_069_000M1_scaffold_867_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25482..26732)
DNA (1251bp) protein (417aa)
Two-component system sensor histidine kinase (EC:2.7.13.3)
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CCO03899.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCO03899.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NXD0_9CLOT
L3_069_000M1_scaffold_867_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26729..28390)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TH59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67226.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
Displaying 25 items

View Taxonomy