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L3_069_000M1_scaffold_1044

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_1044_1
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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29..322
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KSJ3_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK97653.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_069_000M1_scaffold_1044_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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315..1469
DNA (1155bp) protein (385aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BK56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56374.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative site-specific recombinase
L3_069_000M1_scaffold_1044_3
unknown

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comp(1353..1892)
DNA (540bp) protein (180aa)

This feature has no annotations

L3_069_000M1_scaffold_1044_4
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1958..3031)
DNA (1074bp) protein (358aa)
Transcriptional regulator GntR family n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S3D1_BUTPB
GntR family transcriptional regulator
Transcriptional regulator GntR family {ECO:0000313|EMBL:ADL35913.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L3_069_000M1_scaffold_1044_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(3037..3969)
DNA (933bp) protein (311aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
lgt; prolipoprotein diacylglycerol transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMT6_9FIRM
L3_069_000M1_scaffold_1044_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(3977..5248)
DNA (1272bp) protein (424aa)
M16B family peptidase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZN7_9FIRM
M16B family peptidase {ECO:0000313|EMBL:CCZ46273.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
M16B family peptidase
L3_069_000M1_scaffold_1044_7
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(5241..6512)
DNA (1272bp) protein (424aa)
Peptidase M16B family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S605_9FIRM
Peptidase M16B family protein {ECO:0000313|EMBL:CCZ46274.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
peptidase M16B family protein
L3_069_000M1_scaffold_1044_8
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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6752..7117
DNA (366bp) protein (122aa)
UPF0122 protein OBV_28090 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYH8_9FIRM
UPF0122 protein BN483_01384 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_1044_9
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


7125..8492
DNA (1368bp) protein (456aa)
Signal recognition particle protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHR3_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
ffh; signal recognition particle protein
L3_069_000M1_scaffold_1044_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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8565..8804
DNA (240bp) protein (80aa)
30S ribosomal protein S16 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMU2_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsP; 30S ribosomal protein S16
L3_069_000M1_scaffold_1044_11
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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8822..9052
DNA (231bp) protein (77aa)
UPF0109 protein BN483_01387 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZP2_9FIRM
UPF0109 protein BN483_01387 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_1044_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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9159..9707
DNA (549bp) protein (183aa)
Ribosome maturation factor RimM n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYR7_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rimM; ribosome maturation factor RimM
L3_069_000M1_scaffold_1044_13
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

9697..10509
DNA (813bp) protein (271aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SI22_9FIRM
L3_069_000M1_scaffold_1044_14
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(10751..11572)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IA57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43354.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
NLP/P60 protein
L3_069_000M1_scaffold_1044_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(11623..11916)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SI11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46361.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_1044_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12089..12334)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QLQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65590.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_069_000M1_scaffold_1044_17
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(12441..15131)
DNA (2691bp) protein (897aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
pheT; phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S692_9FIRM
L3_069_000M1_scaffold_1044_18
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(15296..16321)
DNA (1026bp) protein (342aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
pheS; phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYR4_9FIRM
L3_069_000M1_scaffold_1044_19
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16847..17047
DNA (201bp) protein (67aa)
PspC domain protein n=2 Tax=Dorea RepID=R7G2F6_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDZ23997.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_069_000M1_scaffold_1044_20
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

17142..17702
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46368.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_1044_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17768..18652)
DNA (885bp) protein (295aa)
CAAX amino protease family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4T3_9CLOT
CAAX amino protease family protein {ECO:0000313|EMBL:CCX50318.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
CAAX protease
L3_069_000M1_scaffold_1044_22
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

19069..20802
DNA (1734bp) protein (578aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
ade; adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZY2_9FIRM
L3_069_000M1_scaffold_1044_23
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21306..22505)
DNA (1200bp) protein (400aa)
Integrase family protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MDD9_9CLOT
Integrase family protein {ECO:0000313|EMBL:AJG98291.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
integrase
L3_069_000M1_scaffold_1044_24
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22632..22829)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035E1B49
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY54395.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_069_000M1_scaffold_1044_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22992..23468)
DNA (477bp) protein (159aa)
Phage transcriptional regulator, ArpU family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C1Y1_9CLOT
Phage transcriptional regulator, ArpU family {ECO:0000313|EMBL:ERI63237.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_069_000M1_scaffold_1044_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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23988..24359
DNA (372bp) protein (124aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETT4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEQ61428.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
putative Xre family DNA-binding protein
L3_069_000M1_scaffold_1044_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24756..25040)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CD20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33589.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Displaying 27 items

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