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L3_069_000M1_scaffold_198

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_198_1

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comp(3..302)
DNA (300bp) protein (100aa)
Integrase core domain protein n=2 Tax=Oscillibacter RepID=U2QTF6_9FIRM
Uncultured bacterium extrachromosomal DNA RGI01569 {ECO:0000313|EMBL:CDL66548.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase
L3_069_000M1_scaffold_198_2

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comp(305..736)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RCF0_9FIRM
Uncultured bacterium extrachromosomal DNA RGI01569 {ECO:0000313|EMBL:CDL66547.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L3_069_000M1_scaffold_198_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(1131..2684)
DNA (1554bp) protein (518aa)
cls; cardiolipin synthase (EC:2.7.8.-)
Cardiolipin synthase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S7H3_9FIRM
Cardiolipin synthase {ECO:0000313|EMBL:CCZ46799.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_069_000M1_scaffold_198_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2740..4206)
DNA (1467bp) protein (489aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV95_9FIRM
L3_069_000M1_scaffold_198_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4377..5207
DNA (831bp) protein (277aa)
Putative pantothenate kinase n=2 Tax=Oscillibacter RepID=U2Q187_9FIRM
Putative pantothenate kinase {ECO:0000313|EMBL:ERK56495.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_069_000M1_scaffold_198_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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5317..6534
DNA (1218bp) protein (406aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DEB3_9FIRM
L3_069_000M1_scaffold_198_7
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(6760..7959)
DNA (1200bp) protein (400aa)
Putative cell division protein FtsW n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNE0_9FIRM
Putative cell division protein FtsW {ECO:0000313|EMBL:CCZ46457.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative cell division protein FtsW
L3_069_000M1_scaffold_198_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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8113..8541
DNA (429bp) protein (143aa)
Putative hydrolase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D2I8_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CDA82015.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative hydrolase
L3_069_000M1_scaffold_198_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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8538..9239
DNA (702bp) protein (234aa)
Peptidase M22 family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1P4_9FIRM
Peptidase M22 family protein {ECO:0000313|EMBL:CCX74088.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
peptidase M22 family protein
L3_069_000M1_scaffold_198_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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9281..9925
DNA (645bp) protein (215aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S080_9FIRM
L3_069_000M1_scaffold_198_11
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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10047..11666
DNA (1620bp) protein (540aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Putative isomerase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SND4_9FIRM
putative isomerase
L3_069_000M1_scaffold_198_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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11747..12484
DNA (738bp) protein (246aa)
ThiF family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SIA2_9FIRM
ThiF family protein {ECO:0000313|EMBL:CCZ46451.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_198_13
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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12481..13167
DNA (687bp) protein (229aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYY5_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCZ46450.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_198_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(13209..13535)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S075_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46448.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
methylated-DNA--protein-cysteine methyltransferase
L3_069_000M1_scaffold_198_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(13532..14206)
DNA (675bp) protein (225aa)
Putative transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNC9_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CCZ46447.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
helix-turn-helix domain-containing protein
L3_069_000M1_scaffold_198_16
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(14312..15202)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SI96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46446.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
eamA-like transporter family protein
L3_069_000M1_scaffold_198_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15419..16285)
DNA (867bp) protein (289aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C736_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERI79843.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Zn-dependent hydrolases, including glyoxylases
L3_069_000M1_scaffold_198_18

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comp(16359..16943)
DNA (585bp) protein (195aa)
TetR/AcrR family transcriptional regulator n=1 Tax=human gut metagenome RepID=K1TQF6_9ZZZZ
TetR/AcrR family transcriptional regulator {ECO:0000313|EMBL:EKC71953.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative TetR family transcriptional regulator
L3_069_000M1_scaffold_198_19
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(17258..17941)
DNA (684bp) protein (228aa)
Possible 5'-nucleotidase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H8H7_9FIRM
Possible 5'-nucleotidase {ECO:0000313|EMBL:CCY21036.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
HAD-superfamily hydrolase
L3_069_000M1_scaffold_198_20
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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18110..18643
DNA (534bp) protein (178aa)
TIGR00730 family protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EWI0_9FIRM
TIGR00730 family protein {ECO:0000313|EMBL:CDB01141.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
conserved hypothetical protein, DprA/Smf-related, family 2
L3_069_000M1_scaffold_198_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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18778..19233
DNA (456bp) protein (152aa)
Transcriptional regulator MerR family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0K7_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CCX73708.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative transcriptional regulator
L3_069_000M1_scaffold_198_22
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

19291..20412
DNA (1122bp) protein (374aa)
4Fe-4S binding domain protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXQ7_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCX72675.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
aldo/keto reductase
L3_069_000M1_scaffold_198_23
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20936..21175)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EK39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03239.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_069_000M1_scaffold_198_24
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21172..21564)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EK39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03239.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_069_000M1_scaffold_198_25
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21638..21952)
DNA (315bp) protein (105aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AUW5_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCX42986.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
L3_069_000M1_scaffold_198_26
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21952..22203)
DNA (252bp) protein (84aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AUW5_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCX42986.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
L3_069_000M1_scaffold_198_27
unknown

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comp(22207..22329)
DNA (123bp) protein (41aa)
Putative membrane protein n=1 Tax=Ruminococcus albus 8 RepID=E9S8M4_RUMAL
L3_069_000M1_scaffold_198_28
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(22322..23176)
DNA (855bp) protein (285aa)
O-Methyltransferase involved in polyketide biosynthesis n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IJE6_9FIRM
O-Methyltransferase involved in polyketide biosynthesis {ECO:0000313|EMBL:CCY40444.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
O-Methyltransferase involved in polyketide biosynthesis
L3_069_000M1_scaffold_198_29
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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comp(23189..24100)
DNA (912bp) protein (304aa)
L-2-amino-thiazoline-4-carboxylic acid hydrolase n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7AW05_9FIRM
L-2-amino-thiazoline-4-carboxylic acid hydrolase {ECO:0000313|EMBL:CDD47927.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
hypothetical protein
L3_069_000M1_scaffold_198_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24097..24879)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95267.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
Displaying items 1-30 of 92 in total

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