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L3_069_000M1_scaffold_245

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_245_1
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(237..947)
DNA (711bp) protein (237aa)
Endopeptidase Clp n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYA9_9FIRM
Endopeptidase Clp {ECO:0000313|EMBL:CCZ46205.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
S14 family peptidase
L3_069_000M1_scaffold_245_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1050..1478)
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LP19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84094.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_069_000M1_scaffold_245_3
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1599..2141)
DNA (543bp) protein (181aa)
Nitroreductase family protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5JUD0_9CLOT
Nitroreductase family protein {ECO:0000313|EMBL:CCY58128.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
Nitroreductase
L3_069_000M1_scaffold_245_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2264..2581)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XB93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47621.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_000M1_scaffold_245_5

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comp(2578..2958)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DHY5_9CLOT
Uncultured bacterium extrachromosomal DNA RGI02175 {ECO:0000313|EMBL:CDL66809.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
L3_069_000M1_scaffold_245_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(3073..3933)
DNA (861bp) protein (287aa)
DegV family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S5U6_9FIRM
DegV family protein {ECO:0000313|EMBL:CCZ46204.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
DegV domain-containing protein CPE0026
L3_069_000M1_scaffold_245_7
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(4109..5503)
DNA (1395bp) protein (465aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZH3_9FIRM
L3_069_000M1_scaffold_245_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(5500..7119)
DNA (1620bp) protein (540aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CYW9_9FIRM
Dephospho-CoA kinase {ECO:0000313|EMBL:CCX73068.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_069_000M1_scaffold_245_9
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(7166..8236)
DNA (1071bp) protein (357aa)
Peptide chain release factor 1 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXF6_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
prfA; peptide chain release factor 1
L3_069_000M1_scaffold_245_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(8236..8733)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S4V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45894.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_245_11
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(8736..9494)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45893.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_245_12
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9505..11406)
DNA (1902bp) protein (634aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TU10_9FIRM
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC71416.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative ABC transporter ATP-binding protein
L3_069_000M1_scaffold_245_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(11403..12752)
DNA (1350bp) protein (450aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D3C8_9FIRM
L3_069_000M1_scaffold_245_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(12753..13805)
DNA (1053bp) protein (351aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S6L5_9FIRM
L3_069_000M1_scaffold_245_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(13960..14964)
DNA (1005bp) protein (335aa)
Putative surface layer protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S086_9FIRM
Putative surface layer protein {ECO:0000313|EMBL:CCZ46458.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative surface layer protein
L3_069_000M1_scaffold_245_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


15838..16149
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVT4_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rplU; 50S ribosomal protein L21
L3_069_000M1_scaffold_245_17
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

16153..16482
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S7W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46929.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_245_18
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


16526..16807
DNA (282bp) protein (94aa)
50S ribosomal protein L27 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S1L8_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpmA; 50S ribosomal protein L27
L3_069_000M1_scaffold_245_19
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16880..17557
DNA (678bp) protein (226aa)
HAD superfamily (subfamily IA) hydrolase, TIGR02254 (EC:3.8.1.2)
HAD hydrolase TIGR02254 family n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D661_9FIRM
HAD hydrolase TIGR02254 family {ECO:0000313|EMBL:CDD85711.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L3_069_000M1_scaffold_245_20

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comp(17559..18437)
DNA (879bp) protein (293aa)
von Willebrand factor type A (Fragment) n=1 Tax=human gut metagenome RepID=K1T4C0_9ZZZZ
von Willebrand factor type A {ECO:0000313|EMBL:EKC67857.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_069_000M1_scaffold_245_21
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18562..19842
DNA (1281bp) protein (427aa)
GTPase Obg n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TLV4_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
obg; GTP-binding protein Obg
L3_069_000M1_scaffold_245_22
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

19864..20043
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SFX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45681.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_245_23
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(20098..20583)
DNA (486bp) protein (162aa)
Acetyltransferase, GNAT family n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LDG4_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFY05179.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
Acetyltransferase (GNAT) family.
L3_069_000M1_scaffold_245_24
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20601..21317)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P4N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC18420.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
ion transport protein
L3_069_000M1_scaffold_245_25
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(21322..21948)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73129.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_069_000M1_scaffold_245_26
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(21965..22498)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DB91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73131.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
N-acetyltransferase GCN5
L3_069_000M1_scaffold_245_27
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(22495..23802)
DNA (1308bp) protein (436aa)
GTPase HflX n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNF5_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hlfX; putative GTP-binding protein HflX
L3_069_000M1_scaffold_245_28
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

24064..25428
DNA (1365bp) protein (455aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S764_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ46659.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_245_29
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(25489..25689)
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=3 Tax=Oscillibacter RepID=R6TEC6_9FIRM
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_069_000M1_scaffold_245_30
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

25950..26660
DNA (711bp) protein (237aa)
Predicted branched-chain amino acid permease (Azaleucine resistance) n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M0A2_9FIRM
Predicted branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:CDB87856.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
Displaying items 1-30 of 71 in total

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