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L3_069_000M1_scaffold_382

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Displaying items 1-30 of 69 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_382_1
unknown

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comp(1..288)
DNA (288bp) protein (96aa)

This feature has no annotations

L3_069_000M1_scaffold_382_2

Not on your lists

comp(487..723)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TPU5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC69629.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_069_000M1_scaffold_382_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1406..1942
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YK27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53098.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
recombinase
L3_069_000M1_scaffold_382_4
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

1896..3068
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5A7Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX39340.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
recombinase
L3_069_000M1_scaffold_382_5
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3470..3811)
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TP12_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
rplQ; 50S ribosomal protein L17
L3_069_000M1_scaffold_382_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(3881..4834)
DNA (954bp) protein (318aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMX9_9FIRM
L3_069_000M1_scaffold_382_7
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(4916..5506)
DNA (591bp) protein (197aa)
30S ribosomal protein S4 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZS4_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsD; 30S ribosomal protein S4
L3_069_000M1_scaffold_382_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5543..5950)
DNA (408bp) protein (136aa)
30S ribosomal protein S11 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXH4_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rpsK; 30S ribosomal protein S11
L3_069_000M1_scaffold_382_9
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(5967..6335)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYL7_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsM; 30S ribosomal protein S13
L3_069_000M1_scaffold_382_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(6359..6472)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=3 Tax=Firmicutes RepID=R5D9M5_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rpmJ; 50S ribosomal protein L36
L3_069_000M1_scaffold_382_11
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6488..6691)
DNA (204bp) protein (68aa)
Translation initiation factor IF-1 n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TVS1_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
infA; translation initiation factor IF-1
L3_069_000M1_scaffold_382_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6710..6988)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HKD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26437.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_069_000M1_scaffold_382_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(6998..7750)
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D8K1_9FIRM
L3_069_000M1_scaffold_382_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(7754..8392)
DNA (639bp) protein (213aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYM2_9FIRM
L3_069_000M1_scaffold_382_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(8404..9690)
DNA (1287bp) protein (429aa)
Protein translocase subunit SecY n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHW7_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
secY; preprotein translocase SecY subunit
L3_069_000M1_scaffold_382_16
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(9691..10131)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMY9_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplO; 50S ribosomal protein L15
L3_069_000M1_scaffold_382_17
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(10144..10326)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZT4_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpmD; 50S ribosomal protein L30
L3_069_000M1_scaffold_382_18
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(10341..10841)
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S645_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsE; 30S ribosomal protein S5
L3_069_000M1_scaffold_382_19
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(10859..11218)
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYM7_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplR; 50S ribosomal protein L18
L3_069_000M1_scaffold_382_20
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(11233..11778)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHX4_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplF; 50S ribosomal protein L6
L3_069_000M1_scaffold_382_21
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(11794..12189)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMZ4_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsH; 30S ribosomal protein S8
L3_069_000M1_scaffold_382_22
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(12509..12694)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZU2_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsZ; 30S ribosomal protein S14 type Z
L3_069_000M1_scaffold_382_23
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(12712..13251)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S649_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplE; 50S ribosomal protein L5
L3_069_000M1_scaffold_382_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(13271..13582)
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYN3_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplX; 50S ribosomal protein L24
L3_069_000M1_scaffold_382_25
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(13597..13965)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHX9_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplN; 50S ribosomal protein L14
L3_069_000M1_scaffold_382_26
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(13981..14244)
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SN01_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsQ; 30S ribosomal protein S17
L3_069_000M1_scaffold_382_27
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(14246..14413)
DNA (168bp) protein (56aa)
50S ribosomal protein L29 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZU7_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpmC; 50S ribosomal protein L29
L3_069_000M1_scaffold_382_28
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(14439..14870)
DNA (432bp) protein (144aa)
50S ribosomal protein L16 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S656_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplP; 50S ribosomal protein L16
L3_069_000M1_scaffold_382_29
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(14870..15724)
DNA (855bp) protein (285aa)
30S ribosomal protein S3 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYN7_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsC; 30S ribosomal protein S3
L3_069_000M1_scaffold_382_30
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(15742..16077)
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHY2_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplV; 50S ribosomal protein L22
Displaying items 1-30 of 69 in total

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