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L3_069_000M1_scaffold_423

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_423_1
unknown

Not on your lists

comp(546..1778)
DNA (1233bp) protein (411aa)

This feature has no annotations

L3_069_000M1_scaffold_423_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1980..2999)
DNA (1020bp) protein (340aa)
Dehydrogenase, FMN-dependent n=2 Tax=Oscillibacter RepID=U2QLF5_9FIRM
Dehydrogenase, FMN-dependent {ECO:0000313|EMBL:ERK57336.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative oxidoreductase
L3_069_000M1_scaffold_423_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

3113..5860
DNA (2748bp) protein (916aa)
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0J3_9FIRM
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase {ECO:0000313|EMBL:CCZ46543.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_069_000M1_scaffold_423_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(5906..6856)
DNA (951bp) protein (317aa)
CorA-like protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AT76_9FIRM
CorA-like protein {ECO:0000313|EMBL:CCX46183.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Mg2 transporter protein CorA family protein
L3_069_000M1_scaffold_423_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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7016..7939
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S736_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46619.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_423_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

7972..9513
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S414_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45559.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_423_7
unknown

Not on your lists

comp(10125..10370)
DNA (246bp) protein (82aa)

This feature has no annotations

L3_069_000M1_scaffold_423_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10473..13703)
DNA (3231bp) protein (1077aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8S6_9FIRM
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component {ECO:0000313|EMBL:CBL41225.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_069_000M1_scaffold_423_9
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13696..14070)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FR68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17028.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Predicted transcriptional regulator
L3_069_000M1_scaffold_423_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

14238..15596
DNA (1359bp) protein (453aa)
Na+/H+ antiporter family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S6Y1_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:CCZ46549.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Na+:H+ antiporter, NhaC family
L3_069_000M1_scaffold_423_11
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

15600..16403
DNA (804bp) protein (268aa)
HAD hydrolase family IIA n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0J6_9FIRM
HAD hydrolase family IIA {ECO:0000313|EMBL:CCZ46548.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
wciA; phosphotransferase
L3_069_000M1_scaffold_423_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16416..17252
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H172_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27241.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rRNA methylases
L3_069_000M1_scaffold_423_13
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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17254..17871
DNA (618bp) protein (206aa)
Methyltransferase domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYE5_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDM98911.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
smtA6; SAM-dependent methyltransferase
L3_069_000M1_scaffold_423_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(17948..18541)
DNA (594bp) protein (198aa)
GTPase (EC:3.6.1.-)
Probable GTP-binding protein EngB n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ33_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_069_000M1_scaffold_423_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(18557..20962)
DNA (2406bp) protein (802aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZU9_9FIRM
L3_069_000M1_scaffold_423_16
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(20974..22251)
DNA (1278bp) protein (426aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNK2_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
L3_069_000M1_scaffold_423_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(22266..22868)
DNA (603bp) protein (201aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D454_9FIRM
L3_069_000M1_scaffold_423_18
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(22964..24355)
DNA (1392bp) protein (464aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Trigger factor n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S6T6_9FIRM
tig; trigger factor
L3_069_000M1_scaffold_423_19
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(24461..25150)
DNA (690bp) protein (230aa)
Ser/Thr phosphatase family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ60_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CCZ46500.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative hydrolase
L3_069_000M1_scaffold_423_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25176..25535)
DNA (360bp) protein (120aa)
UPF0102 protein BN557_01200 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQH5_9FIRM
UPF0102 protein BN557_01200 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_069_000M1_scaffold_423_21
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(25532..26155)
DNA (624bp) protein (208aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNL1_9FIRM
L3_069_000M1_scaffold_423_22
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(26152..27024)
DNA (873bp) protein (291aa)
Ribosome biogenesis GTPase A n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0F8_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative GTP-binding protein
L3_069_000M1_scaffold_423_23

Not on your lists

comp(27039..27659)
DNA (621bp) protein (207aa)
Signal peptidase I {ECO:0000313|EMBL:EKC56539.1}; EC=3.4.21.- {ECO:0000313|EMBL:EKC56539.1};; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I (Fragment) n=1 Tax=human gut metagenome RepID=K1SMF3_9ZZZZ
L3_069_000M1_scaffold_423_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(27824..28165)
DNA (342bp) protein (114aa)
50S ribosomal protein L19 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ71_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplS; 50S ribosomal protein L19
L3_069_000M1_scaffold_423_25
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(28327..28989)
DNA (663bp) protein (221aa)
Putative radical SAM n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S6N3_9FIRM
Putative radical SAM {ECO:0000313|EMBL:CCZ46474.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_000M1_scaffold_423_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28982..30814)
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26187.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Fe-S oxidoreductase
L3_069_000M1_scaffold_423_27
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(30885..31505)
DNA (621bp) protein (207aa)
Peptidase M50 family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SID3_9FIRM
Peptidase M50 family protein {ECO:0000313|EMBL:CCZ46476.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
peptidase M50 family protein
L3_069_000M1_scaffold_423_28
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(31492..32334)
DNA (843bp) protein (281aa)
Putative metalloendopeptidase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNG1_9FIRM
Putative metalloendopeptidase {ECO:0000313|EMBL:CCZ46477.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative metalloendopeptidase
L3_069_000M1_scaffold_423_29
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(32426..33712)
DNA (1287bp) protein (429aa)
Polysaccharide deacetylase family sporulation protein PdaB n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXB4_9FIRM
Polysaccharide deacetylase family sporulation protein PdaB {ECO:0000313|EMBL:CCX45377.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_069_000M1_scaffold_423_30
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(33696..34436)
DNA (741bp) protein (247aa)
Isoleucyl-tRNA synthetase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1Q0_9FIRM
Isoleucyl-tRNA synthetase {ECO:0000313|EMBL:CCX45376.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
metal-dependent phosphoesterase, PHP family
Displaying items 1-30 of 49 in total

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