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L3_069_000M1_scaffold_330

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000M1_scaffold_330_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..493
DNA (492bp) protein (164aa)
NADP-dependent malic enzyme (EC:1.1.1.40)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77155.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_069_000M1_scaffold_330_2
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

731..1297
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D5N6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD85934.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
hypothetical protein
L3_069_000M1_scaffold_330_3
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1304..2326)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F4T2_9ACTN
HNH endonuclease {ECO:0000313|EMBL:EWC95451.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
putative membrane protein
L3_069_000M1_scaffold_330_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2639..3598)
DNA (960bp) protein (320aa)
Putative membrane protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Y0_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EBA39996.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_069_000M1_scaffold_330_5
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3938..7672)
DNA (3735bp) protein (1245aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EGC90320.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EGC90320.1};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Phosphoribosylformylglycinamidine synthase n=1 Tax=Eggerthella sp. HGA1 RepID=F0HK55_9ACTN
phosphoribosylformylglycinamidine synthase
L3_069_000M1_scaffold_330_6
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7894..8688)
DNA (795bp) protein (265aa)
Cobalt transport protein n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QX04_OLSUV
Cobalt transport protein {ECO:0000313|EMBL:EUB31288.1}; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli MSTE5.;"
cobalt transport protein
L3_069_000M1_scaffold_330_7
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8688..10565)
DNA (1878bp) protein (626aa)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F374_9ACTN
ABC transporter
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERL09028.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
L3_069_000M1_scaffold_330_8
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10572..11147)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1WV01_9ACTN
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
hypothetical protein
L3_069_000M1_scaffold_330_9
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11442..12377
DNA (936bp) protein (312aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli MSTE5.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QX00_OLSUV
L3_069_000M1_scaffold_330_10
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12735..14099)
DNA (1365bp) protein (455aa)
UPF0210 protein HMPREF1008_00822 n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F378_9ACTN
UPF0210 protein HMPREF1008_00822 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
hypothetical protein
L3_069_000M1_scaffold_330_11
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14836..16047
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2NA83_CORGP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB06477.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_069_000M1_scaffold_330_12
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16168..17115
DNA (948bp) protein (316aa)
Inner-membrane translocator n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2NA84_CORGP
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AEB06478.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_069_000M1_scaffold_330_13
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17132..18637
DNA (1506bp) protein (502aa)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2NAF2_CORGP
monosaccharide ABC transporter ATP-binding protein, CUT2 family
Monosaccharide ABC transporter ATP-binding protein, CUT2 family {ECO:0000313|EMBL:AEB06479.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_069_000M1_scaffold_330_14
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18650..19633
DNA (984bp) protein (328aa)
Inner-membrane translocator n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2NAF3_CORGP
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AEB06480.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_069_000M1_scaffold_330_15
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19771..21267
DNA (1497bp) protein (499aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00008909};; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F383_9ACTN
L3_069_000M1_scaffold_330_16
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21438..23045
DNA (1608bp) protein (536aa)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F384_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHF02423.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
Carbohydrate kinase, FGGY
L3_069_000M1_scaffold_330_17
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23142..23855
DNA (714bp) protein (238aa)
L-ribulose 5-phosphate 4-epimerase (EC:5.1.3.4)
Putative L-ribulose-5-phosphate 4-epimerase n=1 Tax=Olsenella profusa F0195 RepID=U2UXY8_9ACTN
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ERL07972.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
L3_069_000M1_scaffold_330_18
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23975..25045
DNA (1071bp) protein (357aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Dorea sp. CAG:105 RepID=R5DD00_9FIRM
L3_069_000M1_scaffold_330_19
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25090..26112
DNA (1023bp) protein (341aa)
Transcriptional regulator, LacI family n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N8L5_CORGP
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEB07398.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_069_000M1_scaffold_330_20
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26331..28835
DNA (2505bp) protein (835aa)
Fructose-6-phosphate phosphoketolase (EC:4.1.2.22)
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase n=1 Tax=Collinsella sp. CAG:289 RepID=R7D1Z5_9ACTN
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase {ECO:0000313|EMBL:CDD84211.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
L3_069_000M1_scaffold_330_21
Atopobium sp. oral taxon 199, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29588..30547
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3A4D0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EPD77077.1}; TaxID=1203602 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 199 str. F0494.;"
patatin
L3_069_000M1_scaffold_330_22
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


30786..31226
DNA (441bp) protein (147aa)
50S ribosomal protein L13 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W885_ATOPD
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L3_069_000M1_scaffold_330_23
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


31229..31624
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QY29_OLSUV
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=633147 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 /; VPI D76D-27C) (Lactobacillus uli).;"
L3_069_000M1_scaffold_330_24
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31730..33106
DNA (1377bp) protein (459aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
Phosphoglucosamine mutase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W883_ATOPD
phosphoglucosamine mutase
L3_069_000M1_scaffold_330_25
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33255..33941
DNA (687bp) protein (229aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00102137}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00102157};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CMF6_9ACTN
holo-acyl-carrier-protein synthase
L3_069_000M1_scaffold_330_26
Atopobium rimae, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33947..35560
DNA (1614bp) protein (538aa)
YjeF-like protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CMF7_9ACTN
YjeF-like protein {ECO:0000313|EMBL:EEE17618.1}; TaxID=553184 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium rimae ATCC 49626.;"
carbohydrate kinase
L3_069_000M1_scaffold_330_27
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35599..36759
DNA (1161bp) protein (387aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1WRR5_9ACTN
L3_069_000M1_scaffold_330_28
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36771..37481
DNA (711bp) protein (237aa)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EUB31598.1}; EC=3.2.2.- {ECO:0000313|EMBL:EUB31598.1};; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli MSTE5.;"
Phage SPO1 DNA polymerase-related protein n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QY35_OLSUV
phage SPO1 DNA polymerase-related protein
L3_069_000M1_scaffold_330_29
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37478..37918
DNA (441bp) protein (147aa)
Hydrolase, P-loop family n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1XZD8_9ACTN
Hydrolase, P-loop family {ECO:0000313|EMBL:ERI05337.1}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
hypothetical protein
L3_069_000M1_scaffold_330_30
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38442..38870
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UZ64_EEGSY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK43807.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
Displaying items 1-30 of 47 in total

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