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L3_069_024G1_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_024G1_scaffold_62_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

143..472
DNA (330bp) protein (110aa)
Uncharacterized protein n=15 Tax=Bifidobacterium RepID=B3DS23_BIFLD
Conserved hypothetical membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27988.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_069_024G1_scaffold_62_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

608..1141
DNA (534bp) protein (178aa)
Predicted acetyltransferase n=12 Tax=Bifidobacterium RepID=D6DDF2_BIFLN
GNAT family acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EPD74964.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_069_024G1_scaffold_62_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1522..2037)
DNA (516bp) protein (172aa)
GCN5-related N-acetyltransferase n=9 Tax=Bifidobacterium RepID=D6ZUB3_BIFLJ
acetyltransferase
FR47-like protein {ECO:0000313|EMBL:EIJ25599.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_069_024G1_scaffold_62_4
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2216..2674
DNA (459bp) protein (153aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=B3DS19_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96518.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_069_024G1_scaffold_62_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2736..3368
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3DP18_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70521.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_069_024G1_scaffold_62_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3750..4880
DNA (1131bp) protein (377aa)
VanZ-like protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E1D0_BIFBR
VanZ family protein
VanZ family protein {ECO:0000313|EMBL:AHJ21216.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_069_024G1_scaffold_62_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5704..7104)
DNA (1401bp) protein (467aa)
Amino acid permease n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPN4_BIFBR
Amino acid permease {ECO:0000313|EMBL:EFE89621.1}; Amino acid transport protein {ECO:0000313|EMBL:BAR00036.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
lysP_2; lysine-specific permease
L3_069_024G1_scaffold_62_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7207..8091
DNA (885bp) protein (295aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Probable endonuclease 4 n=2 Tax=Bifidobacterium breve RepID=D4BPN3_BIFBR
Endonuclease IV
L3_069_024G1_scaffold_62_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8221..8913)
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0F0_BIFBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ19396.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_069_024G1_scaffold_62_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9114..11201
DNA (2088bp) protein (696aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Tryptophan synthase, beta subunit n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZX2_BIFBR
TrpB/TrpC bifunctional protein, includes tryptophan synthase beta chain and indole-3-glycerol phosphate synthase
L3_069_024G1_scaffold_62_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11225..12094
DNA (870bp) protein (290aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Tryptophan synthase alpha chain n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CPQ4_BIFBR
Tryptophan synthase alpha chain
L3_069_024G1_scaffold_62_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12329..13276
DNA (948bp) protein (316aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPM8_BIFBR
Prolipoprotein diacylglyceryl transferase
L3_069_024G1_scaffold_62_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13352..14020
DNA (669bp) protein (223aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Ribulose-phosphate 3-epimerase n=4 Tax=Bifidobacterium breve RepID=F6C9D2_BIFBA
Ribulose-phosphate 3-epimerase
L3_069_024G1_scaffold_62_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14070..14333
DNA (264bp) protein (88aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Phosphoribosyl-ATP pyrophosphatase n=6 Tax=Bifidobacterium breve RepID=F6C9D3_BIFBA
Phosphoribosyl-ATP pyrophosphatase
L3_069_024G1_scaffold_62_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14459..15310
DNA (852bp) protein (284aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATP phosphoribosyltransferase n=4 Tax=Bifidobacterium breve RepID=F9Y0E4_BIFBU
ATP phosphoribosyltransferase
L3_069_024G1_scaffold_62_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15333..15950
DNA (618bp) protein (206aa)
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase n=2 Tax=Bifidobacterium breve RepID=H3KZX8_BIFBR
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:ERI86052.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_069_024G1_scaffold_62_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15940..16917
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0E2_BIFBU
Hypothetical protein with DUF881 domain
Uncharacterized protein {ECO:0000313|EMBL:BAR00026.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_069_024G1_scaffold_62_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16917..17249
DNA (333bp) protein (111aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C9D7_BIFBA
Small basic protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27694.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_069_024G1_scaffold_62_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17278..18072
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C9D8_BIFBA
Hypothetical protein with DUF881 domain
Uncharacterized protein {ECO:0000313|EMBL:AEF27768.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_069_024G1_scaffold_62_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18079..18522
DNA (444bp) protein (148aa)
FHA domain protein n=6 Tax=Bifidobacterium breve RepID=F6C9D9_BIFBA
Signal transduction protein garA
Signal transduction protein garA {ECO:0000313|EMBL:AHJ21200.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_069_024G1_scaffold_62_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18601..19233
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C9E0_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI86046.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_069_024G1_scaffold_62_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19350..19757
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AFF1_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74984.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_069_024G1_scaffold_62_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19808..20029)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CPP0_BIFBR
putative membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE95712.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_069_024G1_scaffold_62_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20056..20775)
DNA (720bp) protein (240aa)
Hydrolase or phosphatase n=5 Tax=Bifidobacterium breve RepID=F9Y0D5_BIFBU
Hydrolase or phosphatase
Putative hydrolase {ECO:0000313|EMBL:BAR00019.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_069_024G1_scaffold_62_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20884..21231)
DNA (348bp) protein (116aa)
RNA polymerase-binding protein RbpA n=5 Tax=Bifidobacterium breve RepID=F6C9E4_BIFBA
Hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_069_024G1_scaffold_62_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21345..23933)
DNA (2589bp) protein (863aa)
Helicase helY {ECO:0000313|EMBL:ABE95709.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABE95709.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
helY; Helicase helY (EC:3.6.1.-)
Helicase helY n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0D3_BIFBU
L3_069_024G1_scaffold_62_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23954..24271)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BPL2_BIFBR
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AHJ21193.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_069_024G1_scaffold_62_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24284..26197)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BPL1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:AHJ21192.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Hypothetical protein
L3_069_024G1_scaffold_62_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26338..27840)
DNA (1503bp) protein (501aa)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium breve RepID=UPI0003060BF0
UTP--glucose-1-phosphate uridylyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EPD74991.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_069_024G1_scaffold_62_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27938..28777)
DNA (840bp) protein (280aa)
HAD hydrolase, family IIB n=2 Tax=Bifidobacterium breve RepID=F6C9E9_BIFBA
Hydrolase (HAD superfamily)
HAD hydrolase, family IIB {ECO:0000313|EMBL:AEF27902.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Displaying items 1-30 of 108 in total

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