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L3_069_024G1_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_024G1_scaffold_85_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)
GalD n=2 Tax=Bifidobacterium breve RepID=F9Y1U4_BIFBU
Permease protein of ABC transporter system for sugars, galactan metabolism
GalD {ECO:0000313|EMBL:ADO51665.1}; Permease protein of ABC transporter system for sugars, galactan metabolism {ECO:0000313|EMBL:ABE95116.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_069_024G1_scaffold_85_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(411..1760)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3AK78_BIFBR
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI87442.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
family 1 extracellular solute-binding protein of ABC transporter system
L3_069_024G1_scaffold_85_3
unknown

Not on your lists

comp(1838..2074)
DNA (237bp) protein (79aa)

This feature has no annotations

L3_069_024G1_scaffold_85_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2899..6960)
DNA (4062bp) protein (1354aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4W4_BIFBR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87446.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATP-binding and permeaase modules of ABC transporter system
L3_069_024G1_scaffold_85_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7690..8046)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CSA0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87405.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glucose/fructose transport protein
L3_069_024G1_scaffold_85_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8080..8337)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4T3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87406.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glucose/fructose transport protein
L3_069_024G1_scaffold_85_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8761..10584
DNA (1824bp) protein (608aa)
AMP-binding enzyme n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E063_BIFBR
AMP-binding enzyme {ECO:0000313|EMBL:ERI87407.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
AMP-binding protein
L3_069_024G1_scaffold_85_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11151..12266)
DNA (1116bp) protein (372aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium breve RepID=F9Y1T9_BIFBU
Transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABE95111.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_069_024G1_scaffold_85_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12428..13288)
DNA (861bp) protein (287aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Ribonuclease n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4T7_BIFBR
rnhB; Ribonuclease HII
L3_069_024G1_scaffold_85_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13313..14236)
DNA (924bp) protein (308aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Signal peptidase I n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E067_BIFBR
Signal peptidase I
L3_069_024G1_scaffold_85_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14405..14854)
DNA (450bp) protein (150aa)
50S ribosomal protein L19 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTM5_BIFBR
LSU ribosomal protein L19P
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_069_024G1_scaffold_85_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15141..15656)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AK70_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76729.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L3_069_024G1_scaffold_85_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15770..17560
DNA (1791bp) protein (597aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMK5_BIFBR
ABC transporter, permease protein {ECO:0000313|EMBL:EFE90024.1}; Nitrate ABC transporter permease component {ECO:0000313|EMBL:BAQ99385.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Permease protein of ABC transporter system
L3_069_024G1_scaffold_85_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17689..19107
DNA (1419bp) protein (473aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4U1_BIFBR
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87416.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_069_024G1_scaffold_85_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19618..21318)
DNA (1701bp) protein (567aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
gpi; Glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=5 Tax=Bifidobacterium breve RepID=F6C7G8_BIFBA
L3_069_024G1_scaffold_85_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22193..23194
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZQX6_BIFBR
putative membrane spanning protein with auxin efflux carrier domain
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:ERI87418.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_069_024G1_scaffold_85_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23320..24093)
DNA (774bp) protein (258aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAA2_BIFBR
Hypothetical protein with HAM1 family domain
L3_069_024G1_scaffold_85_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24215..24991)
DNA (777bp) protein (259aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Ribonuclease PH n=5 Tax=Bifidobacterium breve RepID=F6C7G5_BIFBA
Ribonuclease PH
L3_069_024G1_scaffold_85_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25529..26851)
DNA (1323bp) protein (441aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4U5_BIFBR
Nicotinate phosphoribosyltransferase
L3_069_024G1_scaffold_85_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26959..27585
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=H3KZJ1_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20606.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_069_024G1_scaffold_85_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27593..28021)
DNA (429bp) protein (143aa)
Transcriptional regulator, MerR family n=3 Tax=Bifidobacterium breve RepID=F6C7G2_BIFBA
Transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AHJ18681.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_069_024G1_scaffold_85_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28280..29290
DNA (1011bp) protein (337aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Bifidobacterium breve RepID=F6C7G1_BIFBA
oxidoreductase, aldo/keto reductase family protein
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EFE90014.1}; Putative reductase {ECO:0000313|EMBL:BAQ99376.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_069_024G1_scaffold_85_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29485..29778)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJ10_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76718.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein
L3_069_024G1_scaffold_85_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29918..30418
DNA (501bp) protein (167aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Phosphopantetheine adenylyltransferase n=6 Tax=Bifidobacterium breve RepID=F6C7F9_BIFBA
Phosphopantetheine adenylyltransferase
L3_069_024G1_scaffold_85_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30424..31209
DNA (786bp) protein (262aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C7F8_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87427.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_069_024G1_scaffold_85_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31325..31945
DNA (621bp) protein (207aa)
Putative ACR, COG1399 n=2 Tax=Bifidobacterium breve RepID=F6C7F7_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95094.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_069_024G1_scaffold_85_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


32035..32229
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=6 Tax=Bifidobacterium breve RepID=F6C7F6_BIFBA
LSU ribosomal protein L32P
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_069_024G1_scaffold_85_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32402..33145
DNA (744bp) protein (248aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Ribonuclease 3 n=6 Tax=Bifidobacterium breve RepID=F6C7F5_BIFBA
L3_069_024G1_scaffold_85_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33305..35269
DNA (1965bp) protein (655aa)
ilvB; Acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase large subunit {ECO:0000313|EMBL:ABE95091.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ABE95091.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Acetolactate synthase large subunit n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1I9_BIFBU
L3_069_024G1_scaffold_85_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35285..35842
DNA (558bp) protein (186aa)
Acetolactate synthase, small subunit n=4 Tax=Bifidobacterium breve RepID=F6C7F3_BIFBA
Acetolactate synthase small subunit
Acetolactate synthase small subunit {ECO:0000313|EMBL:AHJ20596.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying items 1-30 of 134 in total

View Taxonomy