ggKbase home page

L3_069_024G1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_024G1_scaffold_122_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180..848)
DNA (669bp) protein (223aa)
Uncharacterized lipoprotein YdcL n=990 Tax=Enterobacteriaceae RepID=YDCL_ECO57
lipoprotein YdcL
Uncharacterized protein {ECO:0000313|EMBL:EMX40895.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L3_069_024G1_scaffold_122_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1151..1744)
DNA (594bp) protein (198aa)
Tellurite methyltransferase n=240 Tax=Enterobacteriaceae RepID=TEHB_ECOLI
tehB; putative S-adenosyl-L-methionine-dependent methyltransferase
Tellurite resistance protein TehB {ECO:0000313|EMBL:KDV65207.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L3_069_024G1_scaffold_122_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1741..2733)
DNA (993bp) protein (331aa)
Potassium-tellurite ethidium and proflavin transporter n=94 Tax=Enterobacteriaceae RepID=B7L6E3_ECO55
tehA; potassium-tellurite ethidium and proflavin transporter
Potassium-tellurite ethidium and proflavin transporter {ECO:0000313|EMBL:EZE53577.1}; TaxID=1446549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O118:H16 str. 2009C-4446.;"
L3_069_024G1_scaffold_122_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2857..3837
DNA (981bp) protein (327aa)
Bacterial transferase hexapeptide repeat protein n=57 Tax=Escherichia coli RepID=D8E9C6_ECOLX
Putative transferase {ECO:0000313|EMBL:KEN70566.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
hypothetical protein
L3_069_024G1_scaffold_122_5
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3832..4368)
DNA (537bp) protein (179aa)
Ribosomal-protein-serine acetyltransferase {ECO:0000313|EMBL:EDX33548.1}; EC=2.3.1.- {ECO:0000313|EMBL:EDX33548.1};; TaxID=358708 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 1012.;"
Ribosomal-protein-serine acetyltransferase n=164 Tax=Enterobacteriaceae RepID=A7ZLM0_ECO24
N-acetyltransferase GCN5
L3_069_024G1_scaffold_122_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4431..4655)
DNA (225bp) protein (75aa)
Uncharacterized protein YdcH n=743 Tax=Enterobacteriaceae RepID=YDCH_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDY15780.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
L3_069_024G1_scaffold_122_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4795..6414)
DNA (1620bp) protein (540aa)
Glucans biosynthesis protein D n=798 Tax=Enterobacteriaceae RepID=OPGD_ECO24
mdoD; glucan biosynthesis protein D
Glucans biosynthesis protein D {ECO:0000256|HAMAP-Rule:MF_01068}; Flags: Precursor;; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0522.;"
L3_069_024G1_scaffold_122_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6675..8018)
DNA (1344bp) protein (448aa)
Uncharacterized protein YdcJ n=142 Tax=Enterobacteriaceae RepID=YDCJ_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDY50999.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;"
L3_069_024G1_scaffold_122_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8235..9158
DNA (924bp) protein (308aa)
Putative transcriptional regulator LYSR-type n=1 Tax=Escherichia coli W26 RepID=I0VMZ4_ECOLX
LysR family transcriptional regulator
Putative transcriptional regulator LYSR-type {ECO:0000313|EMBL:EID65510.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L3_069_024G1_scaffold_122_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9196..10836)
DNA (1641bp) protein (547aa)
Methyl-accepting chemotaxis protein III, riboseand galactose sensor receptor n=16 Tax=Escherichia coli RepID=C8U899_ECO10
trg; methyl-accepting chemotaxis protein III, riboseand galactose sensor receptor
Chemotaxis protein {ECO:0000313|EMBL:KJW25495.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_069_024G1_scaffold_122_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11235..11384
DNA (150bp) protein (50aa)
Protein HokB n=94 Tax=Escherichia coli RepID=HOKB_ECOLI
hokB; small toxic polypeptide
Small toxic polypeptide {ECO:0000313|EMBL:EYV05422.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L3_069_024G1_scaffold_122_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11456..11629)
DNA (174bp) protein (58aa)
Uncharacterized protein YdcA n=603 Tax=Enterobacteriaceae RepID=YDCA_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMV62124.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
L3_069_024G1_scaffold_122_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11874..12404)
DNA (531bp) protein (177aa)
Cytochrome b561 n=3 Tax=Escherichia coli RepID=I2VQ10_ECOLX
Cytochrome b561 {ECO:0000313|EMBL:ESA69318.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
cytochrome b561
L3_069_024G1_scaffold_122_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12593..13594
DNA (1002bp) protein (334aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
Glyceraldehyde-3-phosphate dehydrogenase n=272 Tax=Enterobacteriaceae RepID=J7R0P0_ECOLX
gapC; glyceraldehyde-3-phosphate dehydrogenase
L3_069_024G1_scaffold_122_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13636..15075)
DNA (1440bp) protein (480aa)
Aldehyde dehydrogenase A, NAD-linked n=130 Tax=Escherichia coli RepID=B7L6D0_ECO55
aldA; aldehyde dehydrogenase A
Aldehyde dehydrogenase {ECO:0000313|EMBL:AKE84519.1}; TaxID=1048254 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 str. C227-11.;"
L3_069_024G1_scaffold_122_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15272..16072)
DNA (801bp) protein (267aa)
Conserved protein n=62 Tax=Enterobacteriaceae RepID=C6EEU9_ECOBD
hypothetical protein
Protein ydcF {ECO:0000313|EMBL:EOW21007.1}; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE108.;"
L3_069_024G1_scaffold_122_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16344..20246)
DNA (3903bp) protein (1301aa)
ATP-dependent RNA helicase HrpA n=54 Tax=Enterobacteriaceae RepID=E0IVP8_ECOLW
ATP-dependent helicase HrpA {ECO:0000313|EMBL:EGB90480.1}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
hrpA; ATP-dependent RNA helicase HrpA
L3_069_024G1_scaffold_122_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20447..21052
DNA (606bp) protein (202aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=869670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0246.;"
FMN-dependent NADH-azoreductase n=367 Tax=Enterobacteriaceae RepID=AZOR_ECO24
azoreductase
L3_069_024G1_scaffold_122_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21103..22419)
DNA (1317bp) protein (439aa)
PAP2 family protein n=9 Tax=Escherichia coli RepID=B3WGI9_ECOLX
Dual specificity phosphatase, catalytic domain protein {ECO:0000313|EMBL:ESA69312.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
dual specificity phosphatase
L3_069_024G1_scaffold_122_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22409..24166)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=52 Tax=Escherichia coli RepID=D7YF74_ECOLX
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ESD78095.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
Putative lipase
L3_069_024G1_scaffold_122_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24182..25078)
DNA (897bp) protein (299aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
Phosphatidate cytidylyltransferase n=2 Tax=Escherichia coli RepID=T9T7L7_ECOLX
membrane associated CTP-phosphosubstrate transferase
L3_069_024G1_scaffold_122_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25078..25683)
DNA (606bp) protein (202aa)
Uncharacterized protein n=67 Tax=Escherichia coli RepID=B7L6C3_ECO55
inner membrane protein
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ESA69309.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_069_024G1_scaffold_122_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25854..28160)
DNA (2307bp) protein (769aa)
PF10971 family protein n=4 Tax=Escherichia coli RepID=I2WFD1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KIG76363.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L3_069_024G1_scaffold_122_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28224..29084)
DNA (861bp) protein (287aa)
Oxidoreductase, aldo/keto reductase family n=181 Tax=Escherichia coli RepID=A7ZLK3_ECO24
aldo/keto reductase
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EFK48783.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L3_069_024G1_scaffold_122_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29314..29904)
DNA (591bp) protein (197aa)
Phenylacetic acid degradation protein PaaY n=85 Tax=Escherichia coli RepID=B6IAE8_ECOSE
hexapeptide repeat acetyltransferase
PaaY protein {ECO:0000313|EMBL:CAU97393.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L3_069_024G1_scaffold_122_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29886..30836)
DNA (951bp) protein (317aa)
Transcriptional repressor PaaX n=125 Tax=Escherichia RepID=PAAX_ECOLI
paaX; DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive
Phenylacetic acid degradation operon negative regulatory protein PaaX {ECO:0000313|EMBL:KDY62953.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L3_069_024G1_scaffold_122_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30937..32250)
DNA (1314bp) protein (438aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
Phenylacetate-coenzyme A ligase n=196 Tax=Enterobacteriaceae RepID=PAAK_ECOLI
phenylacetate-CoA ligase
L3_069_024G1_scaffold_122_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32277..33482)
DNA (1206bp) protein (402aa)
3-oxoadipyl-CoA thiolase {ECO:0000313|EMBL:EMX51119.1}; EC=2.3.1.174 {ECO:0000313|EMBL:EMX51119.1};; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
Beta-ketoadipyl CoA thiolase n=57 Tax=Escherichia coli RepID=B7L6B7_ECO55
beta-ketoadipyl CoA thiolase
L3_069_024G1_scaffold_122_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33482..33904)
DNA (423bp) protein (141aa)
Acyl-coenzyme A thioesterase PaaI n=503 Tax=Escherichia RepID=PAAI_ECOLI
paaI; putative thioesterase
Phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:EMU63119.1}; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
L3_069_024G1_scaffold_122_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33894..35276)
DNA (1383bp) protein (461aa)
3-hydroxyacyl-CoA dehydrogenase PaaC {ECO:0000313|EMBL:EMX51117.1}; EC=1.1.1.- {ECO:0000313|EMBL:EMX51117.1};; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase PaaC n=4 Tax=Escherichia coli RepID=E9W4J4_ECOLX
Displaying items 1-30 of 50 in total

View Taxonomy