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L3_069_024G1_scaffold_139

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_024G1_scaffold_139_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(104..652)
DNA (549bp) protein (183aa)
Ribosome maturation factor RimM n=1393 Tax=Enterobacteriaceae RepID=RIMM_SHIBS
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
L3_069_024G1_scaffold_139_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(671..919)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Escherichia coli MS 185-1 RepID=D8CJ66_ECOLX
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
L3_069_024G1_scaffold_139_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1056..2417)
DNA (1362bp) protein (454aa)
Signal recognition particle protein n=1280 Tax=Enterobacteriaceae RepID=SRP54_ECO57
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306, ECO:0000313|EMBL:CBJ02321.1}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O78:H11 (strain H10407 / ETEC).;"
L3_069_024G1_scaffold_139_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2509..3375
DNA (867bp) protein (289aa)
Inner membrane protein ypjD n=1 Tax=Escherichia coli KTE101 RepID=L4FV51_ECOLX
ypjD; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD57717.1}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
L3_069_024G1_scaffold_139_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3441..4682
DNA (1242bp) protein (414aa)
UPF0053 inner membrane protein yfjD n=102 Tax=Enterobacteriaceae RepID=E2QQ69_ECOLX
corB; putative magnesium transport protein
Uncharacterized protein {ECO:0000313|EMBL:EMX34776.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L3_069_024G1_scaffold_139_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4804..5409
DNA (606bp) protein (202aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=I0VTR7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA68032.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
hypothetical protein
L3_069_024G1_scaffold_139_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5444..6034)
DNA (591bp) protein (197aa)
Protein GrpE n=14 Tax=Escherichia coli RepID=T6DIZ6_ECOLX
grpE; heat shock protein HSP70 cofactor
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L3_069_024G1_scaffold_139_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6083..6955
DNA (873bp) protein (291aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=656420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M863.;"
inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Escherichia coli RepID=UPI0002BAA0D2
ATP-NAD/AcoX kinase
L3_069_024G1_scaffold_139_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7041..8702
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=85 Tax=Escherichia coli RepID=B7N6K1_ECOLU
recN; recombination and repair protein
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_069_024G1_scaffold_139_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8851..9192
DNA (342bp) protein (114aa)
Outer membrane protein assembly factor BamE n=1339 Tax=Enterobacteriaceae RepID=BAME_ECOL6
OmlA family protein
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
L3_069_024G1_scaffold_139_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9254..9544)
DNA (291bp) protein (97aa)
UPF0125 protein RatB n=642 Tax=Enterobacteriaceae RepID=RATB_ECOLI
hypothetical protein
UPF0125 protein ECP03018671_3125 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
L3_069_024G1_scaffold_139_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9534..10010)
DNA (477bp) protein (159aa)
Ribosome association toxin RatA n=372 Tax=Enterobacteriaceae RepID=RATA_ECOLI
hypothetical protein
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:ESA68039.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_069_024G1_scaffold_139_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10142..10624
DNA (483bp) protein (161aa)
SsrA-binding protein n=1351 Tax=Enterobacteriaceae RepID=SSRP_ECO24
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; Small protein B {ECO:0000256|HAMAP-Rule:MF_00023}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_069_024G1_scaffold_139_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10800..10925
DNA (126bp) protein (42aa)
Escherichia coli chi7122 chi7122 genomic chromosome, chi7122 n=237 Tax=Escherichia RepID=J7R4H7_ECOLX
Escherichia coli chi7122 chi7122 genomic chromosome, chi7122 {ECO:0000313|EMBL:CCK47908.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli chi7122.;"
hypothetical protein
L3_069_024G1_scaffold_139_15
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11307..12515
DNA (1209bp) protein (403aa)
Prophage CP4-57 integrase n=15 Tax=Escherichia coli RepID=M8ZSN3_ECOLX
Phage integrase {ECO:0000313|EMBL:EOU49025.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
integrase
L3_069_024G1_scaffold_139_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12519..14477
DNA (1959bp) protein (653aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=D7XPY4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFU32754.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
hypothetical protein
L3_069_024G1_scaffold_139_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14695..15267)
DNA (573bp) protein (191aa)
Phage polarity suppression protein (Psu) n=12 Tax=Escherichia RepID=E6ATN0_ECOLX
Phage polarity suppression protein {ECO:0000313|EMBL:EIG94337.1}; TaxID=869670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0246.;"
Polarity suppression protein
L3_069_024G1_scaffold_139_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15341..15841)
DNA (501bp) protein (167aa)
Transactivation protein n=41 Tax=Escherichia coli RepID=C4TII8_ECO57
Transactivation protein {ECO:0000313|EMBL:BAH79226.1}; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
phage transcriptional activator
L3_069_024G1_scaffold_139_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15838..16572)
DNA (735bp) protein (245aa)
Glycoprotein 3 n=2 Tax=Escherichia coli RepID=G1YHX6_ECOLX
Glycoprotein 3 (Capsid size determination protein) {ECO:0000313|EMBL:EGI14256.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
Phage capsid and scaffold protein
L3_069_024G1_scaffold_139_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17125..17391
DNA (267bp) protein (89aa)
AlpA family transcriptional regulator n=272 Tax=root RepID=B5ARH9_ECO57
prophage CP4-57 regulatory protein, AlpA family
Uncharacterized protein {ECO:0000313|EMBL:EQX70687.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
L3_069_024G1_scaffold_139_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17388..17987
DNA (600bp) protein (200aa)
Phage protein n=7 Tax=Enterobacteriaceae RepID=B3IQD1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EGJ08263.1}; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
hypothetical protein
L3_069_024G1_scaffold_139_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17980..18267
DNA (288bp) protein (96aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=D7XPX5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFU32763.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
regulatory protein encoded in prophage
L3_069_024G1_scaffold_139_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18260..18715
DNA (456bp) protein (152aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=D7XPX4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOU96419.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
hypothetical protein
L3_069_024G1_scaffold_139_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18851..19171
DNA (321bp) protein (107aa)
Uncharacterized protein n=11 Tax=Escherichia coli RepID=M8KV71_ECOLX
DNA replication protein, phage-associated
Putative uncharacterized protein {ECO:0000313|EMBL:EGI14262.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_069_024G1_scaffold_139_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19186..21519
DNA (2334bp) protein (778aa)
putative prophage DNA primase (EC:2.7.7.-)
Putative prophage DNA primase {ECO:0000313|EMBL:CBG36828.1}; EC=2.7.7.- {ECO:0000313|EMBL:CBG36828.1};; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
Putative prophage DNA primase n=1 Tax=Escherichia coli O44:H18 (strain 042 / EAEC) RepID=D3H2E8_ECO44
L3_069_024G1_scaffold_139_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22196..26764)
DNA (4569bp) protein (1523aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Escherichia coli KTE210 RepID=L3E7L3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EID67524.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
hypothetical protein
L3_069_024G1_scaffold_139_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27077..27550
DNA (474bp) protein (158aa)
Uncharacterized protein n=10 Tax=Escherichia coli RepID=B7M996_ECO8A
hypothetical protein
Serpin B5 {ECO:0000313|EMBL:ETI99593.1}; TaxID=1403944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_B_14.;"
L3_069_024G1_scaffold_139_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27677..28420)
DNA (744bp) protein (248aa)
Uncharacterized protein n=13 Tax=Escherichia coli RepID=D7YHA2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFK03315.1}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
ypjB; hypothetical protein
L3_069_024G1_scaffold_139_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28548..29048)
DNA (501bp) protein (167aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=T6TYV4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ00801.1}; TaxID=1403944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_B_14.;"
hypothetical protein
L3_069_024G1_scaffold_139_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30439..32280
DNA (1842bp) protein (614aa)
Alpha amylase domain protein n=23 Tax=Escherichia coli RepID=A7ZQ88_ECO24
alpha amylase
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EMX36391.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
Displaying items 1-30 of 61 in total

View Taxonomy