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L3_069_024G1_scaffold_194

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_024G1_scaffold_194_1
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1040)
DNA (1038bp) protein (346aa)
Glycerate kinase I n=10 Tax=Shigella flexneri RepID=D2A846_SHIF2
glycerate kinase
Glycerate kinase I {ECO:0000313|EMBL:ADA75491.1}; TaxID=591020 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri serotype X (strain 2002017).;"
L3_069_024G1_scaffold_194_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1137..2027)
DNA (891bp) protein (297aa)
garR; tartronate semialdehyde reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Escherichia coli KTE119 RepID=L3UDN5_ECOLX
Tartronate semialdehyde reductase {ECO:0000313|EMBL:AIF63616.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
L3_069_024G1_scaffold_194_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2057..2827)
DNA (771bp) protein (257aa)
5-keto-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Short=KDGluc aldolase {ECO:0000256|HAMAP-Rule:MF_01291};; Short=KDGlucA {ECO:0000256|HAMAP-Rule:MF_01291};; EC=4.1.2.20 {ECO:0000256|HAMAP-Rule:MF_01291};; 2-dehydro-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 2-keto-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 5-dehydro-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Alpha-keto-beta-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
garL; alpha-dehydro-beta-deoxy-D-glucarate aldolase (EC:4.1.2.20)
5-keto-4-deoxy-D-glucarate aldolase n=1 Tax=Escherichia coli W26 RepID=I0VVK4_ECOLX
L3_069_024G1_scaffold_194_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2843..4177)
DNA (1335bp) protein (445aa)
Probable galactarate transporter n=660 Tax=Enterobacteriaceae RepID=GARP_ECO57
galactarate transporter
D-galactonate transporter family protein {ECO:0000313|EMBL:EHW13097.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L3_069_024G1_scaffold_194_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4552..6123
DNA (1572bp) protein (524aa)
yhaG; D-galactarate dehydratase (EC:4.2.1.42)
Galactarate dehydratase n=1 Tax=Escherichia coli W26 RepID=I0VVK0_ECOLX
Galactarate dehydratase {ECO:0000313|EMBL:EID68166.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L3_069_024G1_scaffold_194_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6272..6607
DNA (336bp) protein (112aa)
Antitoxin PrlF n=560 Tax=Enterobacteriaceae RepID=PRLF_ECOLI
HtrA suppressor protein
HtrA suppressor protein {ECO:0000313|EMBL:EGW87699.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
L3_069_024G1_scaffold_194_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6607..7071
DNA (465bp) protein (155aa)
Toxin YhaV; EC=3.1.-.-;; Ribonuclease YhaV; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Toxin YhaV n=146 Tax=Escherichia coli RepID=YHAV_ECOL6
hypothetical protein
L3_069_024G1_scaffold_194_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7126..7935)
DNA (810bp) protein (270aa)
Putative aga operon transcriptional repressor n=1001 Tax=Enterobacteriaceae RepID=AGAR_ECO57
agaR; DNA-binding transcriptional regulator AgaR
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:KDU32643.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L3_069_024G1_scaffold_194_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8184..9464
DNA (1281bp) protein (427aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=1 Tax=Escherichia coli W26 RepID=I0VVJ6_ECOLX
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
kbaZ; tagatose 6-phosphate aldolase 1, kbaZ subunit
L3_069_024G1_scaffold_194_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9487..9960
DNA (474bp) protein (158aa)
PTS system, N-acetylgalactosamine-specific, IIB component n=754 Tax=Enterobacteriaceae RepID=A8A4U7_ECOHS
agaV; acetylgalactosamine-specific PTS system enzyme IIB component
Putative uncharacterized protein {ECO:0000313|EMBL:EFE61987.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_069_024G1_scaffold_194_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9971..10750
DNA (780bp) protein (260aa)
N-acetylgalactosamine permease IIC component 2 n=1162 Tax=Enterobacteriaceae RepID=C3ST47_ECOLX
agaW; PTS system N-acetylgalactosamine-specific transporter subunit IIC
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:KDX47003.1}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
L3_069_024G1_scaffold_194_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10740..11618
DNA (879bp) protein (293aa)
PTS system N-acetylgalactosamine-specific, IID component n=765 Tax=Enterobacteriaceae RepID=A8A4U9_ECOHS
PTS system hexose/hexosamine family transporter permease IID
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EIG80754.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L3_069_024G1_scaffold_194_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11636..12070
DNA (435bp) protein (145aa)
Phosphotransferase system enzyme subunit IIA component n=941 Tax=Enterobacteriaceae RepID=E2QEH4_ECOLX
agaF; PTS system mannose/sorbose-specific transporter subunit IIA
PTS system fructose IIA component {ECO:0000313|EMBL:EFJ85989.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_069_024G1_scaffold_194_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12067..13200
DNA (1134bp) protein (378aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
N-acetylglucosamine-6-phosphate deacetylase n=2 Tax=Escherichia coli RepID=I2SVH0_ECOLX
N-acetylglucosamine-6-phosphate deacetylase
L3_069_024G1_scaffold_194_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13531..14685
DNA (1155bp) protein (385aa)
Tagatose-6-phosphate ketose/aldose isomerase n=253 Tax=Enterobacteriaceae RepID=B7LH74_ECO55
agaS; tagatose-6-phosphate ketose/aldose isomerase
Tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:EOW02520.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
L3_069_024G1_scaffold_194_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14698..15558
DNA (861bp) protein (287aa)
kbaY; tagatose-bisphosphate aldolase (EC:4.1.2.40)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_01293};; D-tagatose-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Ketose 1,6-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01293}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=1141 Tax=Enterobacteriaceae RepID=KBAY_ECO24
L3_069_024G1_scaffold_194_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15725..16201
DNA (477bp) protein (159aa)
PTS system, D galactosamine-specific, IIB component n=268 Tax=Enterobacteriaceae RepID=A7ZS34_ECO24
agaB; N-acetylgalactosamine-specific enzyme IIB component of PTS
PTS system N-acetylgalactosamine-specific transporter subunit IIB {ECO:0000313|EMBL:KDV41224.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L3_069_024G1_scaffold_194_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16240..17043
DNA (804bp) protein (268aa)
N-acetylgalactosamine permease IIC component 1 n=625 Tax=Enterobacteriaceae RepID=PTPC1_ECOLI
PTS system N-acetylgalactosamine-specific transporter subunit IIC
N-acetylgalactosamine permease IIC component 1 {ECO:0000313|EMBL:EHP65754.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L3_069_024G1_scaffold_194_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17033..17824
DNA (792bp) protein (264aa)
Galactosamine-specific PTS system enzyme IID component n=1112 Tax=Enterobacteriaceae RepID=C3ST22_ECOLX
agaD2; PTS system N-acetylgalactosamine-specific transporter subunit IID
N-acetylgalactosamine permease IID component {ECO:0000313|EMBL:EFZ59232.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L3_069_024G1_scaffold_194_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17879..18580
DNA (702bp) protein (234aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
Galactosamine-6-phosphate isomerase n=181 Tax=Enterobacteriaceae RepID=E0J2V1_ECOLW
agaI; galactosamine-6-phosphate isomerase
L3_069_024G1_scaffold_194_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18980..19564
DNA (585bp) protein (195aa)
Fimbrial protein n=276 Tax=Enterobacteriaceae RepID=A7ZS38_ECO24
yraH; fimbrial-like adhesin protein
Fimbrial protein {ECO:0000313|EMBL:EGI44611.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_069_024G1_scaffold_194_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19644..20339
DNA (696bp) protein (232aa)
Gram-negative pili assembly chaperone protein n=274 Tax=Enterobacteriaceae RepID=A7ZS39_ECO24
pili assembly chaperone protein
Fimbrial protein {ECO:0000313|EMBL:EYV13814.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L3_069_024G1_scaffold_194_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20369..22885
DNA (2517bp) protein (839aa)
Fimbrial usher family protein n=49 Tax=Escherichia coli RepID=A7ZS40_ECO24
fimbrial usher family protein
Membrane protein {ECO:0000313|EMBL:KHJ16549.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_069_024G1_scaffold_194_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22896..23987
DNA (1092bp) protein (364aa)
Fimbrial protein n=38 Tax=Escherichia coli RepID=T2G213_ECOLX
yraK; putative fimbrial protein
Fimbrial-like protein yraK {ECO:0000313|EMBL:EFE62001.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_069_024G1_scaffold_194_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24030..24890)
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
Ribosomal RNA small subunit methyltransferase I domain protein n=3 Tax=Escherichia coli RepID=M8WD35_ECOLX
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
L3_069_024G1_scaffold_194_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24954..26990
DNA (2037bp) protein (679aa)
Penicillin-binding protein activator LpoA n=140 Tax=Escherichia coli RepID=A7ZS43_ECO24
LppC family lipoprotein
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0522.;"
L3_069_024G1_scaffold_194_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26948..27343
DNA (396bp) protein (132aa)
UPF0102 protein YraN n=214 Tax=Enterobacteriaceae RepID=YRAN_ECO55
yraN; hypothetical protein
UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
L3_069_024G1_scaffold_194_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27363..27953
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=768 Tax=Enterobacteriaceae RepID=DIAA_ECO24
putative phosphoheptose isomerase
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L3_069_024G1_scaffold_194_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27963..28538
DNA (576bp) protein (192aa)
Uncharacterized protein YraP n=1098 Tax=Enterobacteriaceae RepID=YRAP_ECO57
yraP; outer membrane lipoprotein
BON domain protein {ECO:0000313|EMBL:KEJ44649.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L3_069_024G1_scaffold_194_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28652..29692)
DNA (1041bp) protein (347aa)
Permease family protein n=2 Tax=Escherichia coli RepID=G1ZP77_ECOLX
yraQ; putative permease
Putative permease {ECO:0000313|EMBL:EFK44723.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
Displaying items 1-30 of 46 in total

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