ggKbase home page

L3_069_024G1_scaffold_241

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_024G1_scaffold_241_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..264
DNA (264bp) protein (88aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=V8K8D0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETE20949.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
L3_069_024G1_scaffold_241_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(350..2029)
DNA (1680bp) protein (560aa)
Cellulose synthase operon protein YhjU n=3 Tax=Escherichia coli RepID=L3E425_ECOLX
Membrane protein {ECO:0000313|EMBL:KJW47694.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
yhjU; putative inner membrane protein
L3_069_024G1_scaffold_241_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2026..2217)
DNA (192bp) protein (64aa)
Protein BcsF homolog n=1329 Tax=Enterobacteriaceae RepID=BCSF_ECOL6
cellulose biosynthesis protein BcsF
Celllulose biosynthesis operon protein BcsF/YhjT {ECO:0000313|EMBL:EHP63847.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L3_069_024G1_scaffold_241_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2214..3773)
DNA (1560bp) protein (520aa)
YhjS protein n=48 Tax=Escherichia coli RepID=D6I1Q5_ECOLX
Cellulose biosynthesis protein BcsE {ECO:0000313|EMBL:KDV40850.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
bcsE; cellulose biosynthesis protease
L3_069_024G1_scaffold_241_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4058..4246
DNA (189bp) protein (63aa)
Uncharacterized protein YhjR n=596 Tax=Enterobacteriaceae RepID=YHJR_ECOLI
yhjR; hypothetical protein
PF10945 family protein {ECO:0000313|EMBL:EII44241.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
L3_069_024G1_scaffold_241_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4258..5010
DNA (753bp) protein (251aa)
Putative cellulose biosynthesis protein BcsQ n=459 Tax=Enterobacteriaceae RepID=BCSQ_ECOLI
cell division protein
Cellulose synthase operon protein YhjQ {ECO:0000313|EMBL:KEL84412.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
L3_069_024G1_scaffold_241_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5007..7625
DNA (2619bp) protein (873aa)
bcsA; cellulose synthase catalytic subunit (EC:2.4.1.12)
Cellulose synthase catalytic subunit (UDP-forming) n=4 Tax=Escherichia coli RepID=F4VKI3_ECOLX
BcsA {ECO:0000313|EMBL:EFE61394.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_069_024G1_scaffold_241_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7672..9975
DNA (2304bp) protein (768aa)
Cyclic di-GMP-binding protein (Cellulose synthase regulator subunit B) n=1 Tax=Escherichia coli O78:H11 (strain H10407 / ETEC) RepID=E3PMC2_ECOH1
Cellulose synthase subunit B {ECO:0000313|EMBL:ACT27283.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
cyclic di-GMP-binding protein (cellulose synthase regulator subunit B)
L3_069_024G1_scaffold_241_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9982..11088
DNA (1107bp) protein (369aa)
endo-1,4-D-glucanase (EC:3.2.1.4)
Glucanase {ECO:0000256|RuleBase:RU361167}; EC=3.2.1.- {ECO:0000256|RuleBase:RU361167};; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
Endo-1,4-D-glucanase n=274 Tax=Enterobacteriaceae RepID=B7L614_ECO55
L3_069_024G1_scaffold_241_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11070..14543
DNA (3474bp) protein (1158aa)
Cellulose synthase operon C domain protein n=12 Tax=Escherichia coli RepID=M4JVZ9_ECOLX
Cellulose synthase operon protein C {ECO:0000313|EMBL:EMX35658.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
Cellulose synthase operon C domain protein precursor
L3_069_024G1_scaffold_241_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14664..16613
DNA (1950bp) protein (650aa)
Uncharacterized protein n=234 Tax=Enterobacteriaceae RepID=J7R799_ECOLX
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ESA64995.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
yhjK; putative diguanylate cyclase
L3_069_024G1_scaffold_241_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16796..18082
DNA (1287bp) protein (429aa)
C4-dicarboxylate transport protein n=1124 Tax=Enterobacteriaceae RepID=DCTA_ECO24
sodium:dicarboxylate symporter
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
L3_069_024G1_scaffold_241_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18303..19799
DNA (1497bp) protein (499aa)
Peptidase, M16 (Pitrilysin) family n=242 Tax=Enterobacteriaceae RepID=A7ZT68_ECO24
yhjJ; zinc-dependent peptidase
Insulinase family protease {ECO:0000313|EMBL:EHW11735.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L3_069_024G1_scaffold_241_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19895..20824)
DNA (930bp) protein (310aa)
2-dehydro-3-deoxygluconokinase n=1 Tax=Escherichia coli KTE210 RepID=L3E2E4_ECOLX
Ketodeoxygluconokinase {ECO:0000313|EMBL:KIH03866.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
kdgK; ketodeoxygluconokinase KdgK
L3_069_024G1_scaffold_241_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21056..21823
DNA (768bp) protein (256aa)
Cyclic di-GMP phosphodiesterase YhjH n=420 Tax=Enterobacteriaceae RepID=YHJH_ECOLI
EAL domain-containing protein
Diguanylate phosphodiesterase {ECO:0000313|EMBL:EKJ80970.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L3_069_024G1_scaffold_241_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21893..23953
DNA (2061bp) protein (687aa)
Uncharacterized protein YhjG n=291 Tax=Enterobacteriaceae RepID=YHJG_ECOLI
AsmA family protein {ECO:0000313|EMBL:ESD73020.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
AsmA family protein
L3_069_024G1_scaffold_241_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24187..25509)
DNA (1323bp) protein (441aa)
Inner membrane metabolite transport protein YhjE n=545 Tax=Enterobacteriaceae RepID=YHJE_ECOLI
inner membrane metabolite transport protein yhjE
Inner membrane metabolite transport protein yhjE {ECO:0000313|EMBL:EGP23145.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
L3_069_024G1_scaffold_241_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25920..26933)
DNA (1014bp) protein (338aa)
Inner membrane protein yhjD n=1008 Tax=Enterobacteriaceae RepID=C3SNL7_ECOLX
hypothetical protein
Inner membrane protein YhjD {ECO:0000313|EMBL:KEN44990.1}; TaxID=1444091 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C2.;"
L3_069_024G1_scaffold_241_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26982..27953)
DNA (972bp) protein (324aa)
Predicted DNA-binding transcriptional regulator n=324 Tax=Enterobacteriaceae RepID=C8TJV8_ECO26
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:EZE20941.1}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
L3_069_024G1_scaffold_241_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28401..29003
DNA (603bp) protein (201aa)
Putative HTH-type transcriptional regulator YhjB n=528 Tax=Enterobacteriaceae RepID=YHJB_ECOLI
two component LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ESD73016.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L3_069_024G1_scaffold_241_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29054..30703)
DNA (1650bp) protein (550aa)
Cytoplasmic trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; EC=3.2.1.28 {ECO:0000256|HAMAP-Rule:MF_01059};; Alpha,alpha-trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; Alpha,alpha-trehalose glucohydrolase {ECO:0000256|HAMAP-Rule:MF_01059}; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.7.;"
treF; trehalase (EC:3.2.1.28)
Cytoplasmic trehalase n=344 Tax=Enterobacteriaceae RepID=TREF_ECO24
L3_069_024G1_scaffold_241_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31108..32505
DNA (1398bp) protein (466aa)
Cytochrome C peroxidase (Cpp-like) n=332 Tax=Enterobacteriaceae RepID=B7L601_ECO55
yhjA; cytochrome C peroxidase
Cytochrome C peroxidase {ECO:0000313|EMBL:EJE81888.1}; TaxID=1165939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H11 str. CVM9455.;"
L3_069_024G1_scaffold_241_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32716..33108
DNA (393bp) protein (131aa)
gadA; glutamate decarboxylase A, PLP-dependent (EC:4.1.1.15)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
Glutamate decarboxylase (Fragment) n=1 Tax=Escherichia coli Envira 8/11 RepID=M9JZS0_ECOLX
Displaying 23 items

View Taxonomy