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L3_069_049G1_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 264 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_4_1
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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2..352
DNA (351bp) protein (117aa)
MFS transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B562AC
Uncharacterized protein {ECO:0000313|EMBL:EJZ88269.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
major facilitator transporter
L3_069_049G1_scaffold_4_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

757..1230
DNA (474bp) protein (158aa)
UPI0003D69012 related cluster n=1 Tax=unknown RepID=UPI0003D69012
Methionine sulfoxide reductase A {ECO:0000313|EMBL:ETI83303.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_049G1_scaffold_4_3
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1275..1772
DNA (498bp) protein (166aa)
protein-S-isoprenylcysteine methyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B765CE
Uncharacterized protein {ECO:0000313|EMBL:EJZ86390.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
hypothetical protein
L3_069_049G1_scaffold_4_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1782..4124)
DNA (2343bp) protein (781aa)
membrane-associated lipoprotein precursor n=1 Tax=Varibaculum cambriense RepID=UPI0003B631BA
Uncharacterized protein {ECO:0000313|EMBL:ETI83301.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
PARCEL domain-containing protein
L3_069_049G1_scaffold_4_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4264..6030)
DNA (1767bp) protein (589aa)
ABC transporter ATP-binding protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B4D447
Uncharacterized protein {ECO:0000313|EMBL:ETI83298.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein/membrane protein
L3_069_049G1_scaffold_4_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6032..7846)
DNA (1815bp) protein (605aa)
ABC transporter ATP-binding protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6B3A7
Uncharacterized protein {ECO:0000313|EMBL:ETI83297.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein/membrane protein
L3_069_049G1_scaffold_4_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7860..9323)
DNA (1464bp) protein (488aa)
ABC transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B6C7C8
Uncharacterized protein {ECO:0000313|EMBL:ETI83296.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein
L3_069_049G1_scaffold_4_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9320..10129)
DNA (810bp) protein (270aa)
ABC transporter permease n=1 Tax=Varibaculum cambriense RepID=UPI0003B331C6
Uncharacterized protein {ECO:0000313|EMBL:ETI83295.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter permease
L3_069_049G1_scaffold_4_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10129..10695)
DNA (567bp) protein (189aa)
permease n=1 Tax=Varibaculum cambriense RepID=UPI0003B3F6D1
Uncharacterized protein {ECO:0000313|EMBL:ETI83294.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
permease
L3_069_049G1_scaffold_4_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11000..12847
DNA (1848bp) protein (616aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00070762}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
phosphoenolpyruvate carboxykinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B5A55E
phosphoenolpyruvate carboxykinase
L3_069_049G1_scaffold_4_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13859..14527)
DNA (669bp) protein (223aa)
UPI0003D5FA83 related cluster n=1 Tax=unknown RepID=UPI0003D5FA83
Uncharacterized protein {ECO:0000313|EMBL:ETI83291.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
potassium transporter
L3_069_049G1_scaffold_4_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14520..15875)
DNA (1356bp) protein (452aa)
ATPase n=1 Tax=Varibaculum cambriense RepID=UPI0003B2E6C3
Uncharacterized protein {ECO:0000313|EMBL:ETI83290.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
TrkH family potassium uptake protein
L3_069_049G1_scaffold_4_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16096..18549
DNA (2454bp) protein (818aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B62FD5
Uncharacterized protein {ECO:0000313|EMBL:ETI83289.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_4_14
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(18634..19524)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B75D76
Predicted permease%2C DMT superfamily {ECO:0000313|EMBL:CRH88237.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
permease
L3_069_049G1_scaffold_4_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19608..20177)
DNA (570bp) protein (190aa)
nitroreductase n=1 Tax=Varibaculum cambriense RepID=UPI0003B76AAA
Uncharacterized protein {ECO:0000313|EMBL:ETI83287.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
nitroreductase
L3_069_049G1_scaffold_4_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20287..22968)
DNA (2682bp) protein (894aa)
Non-specific serine/threonine protein kinase (EC:2.7.11.1)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B3E7DE
Uncharacterized protein {ECO:0000313|EMBL:ETI83285.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_4_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23024..23785
DNA (762bp) protein (254aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Varibaculum cambriense RepID=UPI0003B40676
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:ETI83284.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
L3_069_049G1_scaffold_4_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23816..25000)
DNA (1185bp) protein (395aa)
cystathionine beta-lyase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4C110
Putative cystathionine beta-lyase {ECO:0000313|EMBL:ETI83283.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
class I and II aminotransferase protein
L3_069_049G1_scaffold_4_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25174..26706
DNA (1533bp) protein (511aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glutamyl-tRNA synthetase n=1 Tax=Varibaculum cambriense RepID=UPI0003B44ADD
glutamyl-tRNA synthetase
L3_069_049G1_scaffold_4_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


27083..28387
DNA (1305bp) protein (435aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
UPI0003D59B21 related cluster n=1 Tax=unknown RepID=UPI0003D59B21
Uncharacterized protein {ECO:0000313|EMBL:ETI83281.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_4_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28462..29835)
DNA (1374bp) protein (458aa)
sodium:proton antiporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B603AE
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
nhaA; NhaA family sodium:proton (Na+:H+) antiporter
L3_069_049G1_scaffold_4_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30218..31135
DNA (918bp) protein (306aa)
Bax1 inhibitor-like family protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B4A3EF
Membrane spanning protein {ECO:0000313|EMBL:ETI83279.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_049G1_scaffold_4_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31209..31706
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B66A34
Uncharacterized protein {ECO:0000313|EMBL:ETI83278.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
N-acetyltransferase GCN5
L3_069_049G1_scaffold_4_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31814..33412
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B60753
Uncharacterized protein {ECO:0000313|EMBL:ETI83277.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
integral membrane protein
L3_069_049G1_scaffold_4_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33417..34181)
DNA (765bp) protein (255aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UDP pyrophosphate synthase (EC:2.5.1.31)
UDP pyrophosphate synthase n=1 Tax=Varibaculum cambriense RepID=UPI0003B50397
L3_069_049G1_scaffold_4_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34332..35024
DNA (693bp) protein (231aa)
hemolysin n=1 Tax=Varibaculum cambriense RepID=UPI0003B4C635
Uncharacterized protein {ECO:0000313|EMBL:ETI83275.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Hly-III family protein
L3_069_049G1_scaffold_4_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35163..35639
DNA (477bp) protein (159aa)
transcription elongation factor GreA n=1 Tax=Varibaculum cambriense RepID=UPI0003B499E8
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
transcription elongation factor GreA
L3_069_049G1_scaffold_4_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35683..37158)
DNA (1476bp) protein (492aa)
membrane protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6A377
Uncharacterized protein {ECO:0000313|EMBL:ETI83273.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_049G1_scaffold_4_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37161..37376)
DNA (216bp) protein (72aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
exodeoxyribonuclease VII n=1 Tax=Varibaculum cambriense RepID=UPI0003B46B7C
exodeoxyribonuclease VII, small subunit
L3_069_049G1_scaffold_4_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37386..38654)
DNA (1269bp) protein (423aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
xseA; exodeoxyribonuclease VII (EC:3.1.11.6)
exodeoxyribonuclease VII large subunit n=1 Tax=Varibaculum cambriense RepID=UPI0003B45279
Displaying items 1-30 of 264 in total

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